KEGG T00076: 2542248

Schizosaccharomyces pombe (fission yeast): 2542248

Entry

2542248           CDS       T00076

Symbol

ypt5, SPOM_SPAC6F6.15

Name

(RefSeq) GTPase Ypt5

K07888

Ras-related protein Rab-5B

Organism

spo Schizosaccharomyces pombe (fission yeast)

Pathway

spo04144

Endocytosis

spo04145

Phagosome

spo04148

Efferocytosis

Brite

KEGG Orthology (KO) [BR:spo00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    2542248 (ypt5)
   04145 Phagosome
    2542248 (ypt5)
   04148 Efferocytosis
    2542248 (ypt5)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spo04131]
    2542248 (ypt5)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spo04147]
    2542248 (ypt5)
   04031 GTP-binding proteins [BR:spo04031]
    2542248 (ypt5)
Membrane trafficking [BR:spo04131]
Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    2542248 (ypt5)
Endosome - Lysosome transport
    2542248 (ypt5)
Exosome [BR:spo04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   2542248 (ypt5)
  Exosomal proteins of other body fluids (saliva and urine)
   2542248 (ypt5)
  Exosomal proteins of colorectal cancer cells
   2542248 (ypt5)
  Exosomal proteins of melanoma cells
   2542248 (ypt5)
GTP-binding proteins [BR:spo04031]
Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    2542248 (ypt5)

SSDB

Motif

Pfam:

Ras Roc Arf GTP_EFTU RsgA_GTPase Gtr1_RagA MMR_HSR1 PduV-EutP AAA_16 TniB Mur_ligase_C

Other DBs

NCBI-GeneID:

2542248

NCBI-ProteinID:

NP_001342856

PomBase:

SPAC6F6.15 SPAC6F6.15.1

LinkDB

Position

I:join(2762302..2762382,2762454..2762493,2762562..2762585,2762662..2762722,2762787..2762833,2762875..2762921,2763001..2763126,2763181..2763390)

AA seq 211 aa
MASNTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDE
NTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEG
IVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLE
DKLNQARGAVNRGVNLSEARPAAQPSGSCSC

NT seq 636 nt +upstreamnt +downstreamnt
atggcatcaaatacagctccaaagaatgtcgttacaatcaatcagaagcttgttcttctt
ggtgattccgccgttggcaaaagtagtctcgttcttcgattcgttaaagatcaatttgat
gattacagagaaagcaccattggagctgcttttttgactcaaacccttcctatagatgaa
aacacttccgtaaaactcgaaatttgggatacggctggtcaggaacgttataaatctcta
gctcctatgtactatcgaaatgctaattgcgctattgtcgtatacgatattactcaagct
gcatctctagaaaaggccaaatcttggattaaggaacttcagcgtcaagctccagagggt
attgttatagctttggccggcaacaagctggatcttgcccaagaacgtagagctgttgag
aaagctgatgctgaagcatatgccgctgaggctaatcttttattctttgaaacttctgct
aagactgctgaaaatgtaaatgagctttttactgctattgccaaaaagcttcccttagaa
gataagctcaaccaggccagaggcgctgtgaatcgtggtgtcaatttgtcagaagctcgg
cctgctgctcaaccaagcggttcatgctcttgctaa

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