Schizosaccharomyces pombe (fission yeast): 2542264
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Entry
2542264 CDS
T00076
Symbol
trm401, SPOM_SPAC17D4.04
Name
(RefSeq) tRNA (cytosine-5-)-methyltransferase
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
2542264 (trm401)
Enzymes [BR:
spo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
2542264 (trm401)
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
2542264 (trm401)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
2542264
NCBI-ProteinID:
NP_594695
PomBase:
SPAC17D4.04
SPAC17D4.04.1
UniProt:
Q9HGQ2
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All DBs
Position
I:join(4729751..4729783,4729834..4729880,4729920..4730042,4730088..4731893,4731938..4731995)
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AA seq
688 aa
AA seq
DB search
MGRKHYSSKKNRSKKGEFVNWDLIERKNENFEKYYRLQKLVTEDDFILLKQKLTEQLPTT
FRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSLPWYPDGMAFMLDISKEVIR
KSPHLKALQEFLVLETEAGDINRQESVSMVPPLLLNVESHHKVLDMCAAPGSKTAQLLEA
LHKPTKKEDITTLLPSGIVIANDSDNKRAHMLVHQIKRLNSPNVLIVNHDASFLPNFHLS
SPDGKKFLKFDRILADVPCSGDGTFRKNIALWNEWSLKTALGLHATQIKILMRGLQLLEK
GGRLVYSTCSLNPIENEAVVSAVLNATRGSVRLVDVSSELPQLKRSQGVDNWVVCDSDLN
IYPSFDTLPKELYEKMPPTLWPLPKKELAELNIQNCLRIYPHFQNTGGFFVAVLEKYENL
TSSMKTAVDDNKVFLREQKLPSEQASKKRKQDTQETSSDSKLAEVKPKGKNGGNRFHELD
PFVYIKEDDQALEKIYKKFGIDEAIIKKNQFFVRNVNGVPTKAIYISNDLFRNVIENNRN
RVKFVHGGLKIFVRQDFGSLSREIAEKNGTCVFRVQSDGANLASHFIAESCLFHTTLSDL
FILLDHEAVTIDDFPEDSLFRKEYNHLDLGSTLLHVDLAKEESVIKKQVYIPLWKSVRIC
NVLLSNSEKRTLKLQIEGPQSSIHKHNT
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtaagcattattctagtaaaaaaaataggtctaaaaaaggggagtttgtaaac
tgggatttaattgagagaaaaaatgaaaactttgaaaagtactacaggcttcagaaatta
gtgacggaggatgactttatccttttaaagcaaaagcttactgaacaactcccgacaaca
tttcgaataactgcatcgattcctcatgctactcaagttcgtgattattttatagaacac
tactatccactcattgagaatgcaagaactgaggatgcgaaaatccccttgccagtttca
cttccatggtatcctgatggaatggcttttatgctggacatttctaaggaagttattcga
aaaagccctcatctcaaggcacttcaagaatttcttgtacttgaaacagaagcgggtgac
ataaacaggcaagaatctgtaagtatggttccaccattacttcttaatgtagagagtcac
cacaaagttttggacatgtgtgcggcgcctggttctaagacagctcaattactcgaggca
cttcacaaaccaactaagaaagaagatattactactttgttgccttcaggaattgttatt
gcaaatgatagtgacaataaaagagcgcatatgcttgtacatcagattaagcgattaaat
tctccaaatgtgttaattgttaatcacgatgcttcctttttgccgaatttccatctatct
tctcccgacggtaaaaagttccttaagtttgatcgtatccttgctgatgtcccatgctct
ggagatggaacctttagaaaaaacattgctttatggaatgagtggtctttgaaaacagct
ttagggcttcacgcgacacaaattaagattttaatgagaggtttacaactgttggaaaaa
ggaggaagattggtgtattcaacatgttcattaaatccaattgaaaatgaggcagtggtt
tctgctgtcttgaatgctacccgaggttctgtaaggttggtggatgttagttcggagctt
cctcagttaaaacgtagtcaaggtgttgataactgggtagtttgtgattccgatctaaat
atttatccttcatttgataccttgccaaaggagctttacgaaaaaatgcctcctacttta
tggccactaccaaagaaagaacttgctgagctgaatattcaaaattgcttacgtatttat
ccacatttccaaaatactggaggcttttttgttgcagttttagaaaaatatgaaaatctt
actagctctatgaaaactgccgtcgacgataacaaggtttttttacgagaacaaaagttg
ccaagtgaacaagcatcaaaaaaacgtaaacaagatactcaagaaacatcttcggattca
aaattagccgaagttaaaccaaaaggaaaaaatgggggcaatcgatttcacgaattggat
cctttcgtgtatataaaagaggacgatcaagctctcgagaaaatctataagaagtttggc
attgatgaagctatcataaagaagaatcagtttttcgttagaaatgtcaatggtgtccct
acgaaagccatttatatttccaacgatcttttcagaaacgtaattgagaacaatcgtaat
cgtgttaaattcgtgcatggtggtctcaaaatttttgtgagacaagattttggaagtctt
tcaagagagatagcagaaaaaaacggtacttgcgtttttcgagttcaaagcgatggagcg
aatcttgcttctcattttatcgctgaaagctgtttgtttcatactacattatctgatttg
ttcattttattagaccatgaagccgtgaccattgacgattttcctgaagacagtttgttc
aggaaagaatataaccatttggatcttggaagcactctactccatgttgatttggcaaaa
gaagaaagcgttataaagaagcaagtctacatacctttatggaaaagtgtgcgtatttgc
aacgttttgttatcgaattcagaaaaaaggacattaaaattacagatagaagggccacag
agttcaatacacaaacataacacttga
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