Schizosaccharomyces pombe (fission yeast): 2542325
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Entry
2542325 CDS
T00076
Symbol
mot2, SPOM_SPAC16C9.04C
Name
(RefSeq) CCR4-Not complex subunit Mot2
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2542325 (mot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spo03000
]
2542325 (mot2)
03019 Messenger RNA biogenesis [BR:
spo03019
]
2542325 (mot2)
04121 Ubiquitin system [BR:
spo04121
]
2542325 (mot2)
Enzymes [BR:
spo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
2542325 (mot2)
Transcription factors [BR:
spo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
2542325 (mot2)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
2542325 (mot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
2542325 (mot2)
Ubiquitin system [BR:
spo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
2542325 (mot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-UDP
Prok-RING_4
Rtf2
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
2542325
NCBI-ProteinID:
NP_593078
PomBase:
SPAC16C9.04c
SPAC16C9.04c.1
UniProt:
Q09818
LinkDB
All DBs
Position
I:complement(join(796993..798229,798318..798497,798548..798600))
Genome browser
AA seq
489 aa
AA seq
DB search
MLKTQEIYSSEDEDDMCCPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLNGRCPAC
RRLYTEENVQWRPVTAEEWKMDLHRKNERKKREKERKEVELSNRKHLANIRVVQKNLAYV
NGLSPKVANEENINVLKGPEYFGQYGKIIKIAINKKAAANSANGHVGVYITYQRKEDAAR
AIAAIDGSVSDGRHLRASYGTTKYCTSYLRNQQCPNPSCMYLHEPGDEVDSYTKEDLASL
QHTRPLSTKPNVVNGATHSPSPSLPFKTPLLPVTKTPLEEANSSPAAQNQHITTVDHVHP
QVSMTPSLSTNNTATSVPAPYSSAASVNVVPGHATTILHHEESSALPPTAAWAKLSPSVL
QERLRAAVNQQPLDALKSSSTQTSIPKIQKLKAAKLPSEEENTTKWLNKAINDLVSSLSK
INFSTEGTEFDKKQIEMIQNLPPLFVFNARSVIDKEVVPEQEKSAENQPPTSLGINNGNP
VMPPPGFQS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaacgcaagagatatattcttcagaagatgaggatgacatgtgttgtcctcta
tgtatggaagaaattgatatctctgataaaaacttcaaaccatgccaatgcggatacaga
gtttgtagattttgctggcaccatatcaaagaagatctaaatggccgttgtcctgcatgt
cgccgtctgtacactgaagaaaatgttcaatggcggcctgtcacggcagaggaatggaag
atggacttacatcgaaaaaacgagaggaagaaacgcgagaaagagaggaaggaagtcgag
ctttcaaacaggaagcatcttgcaaatattcgtgttgtacaaaagaaccttgcctatgta
aacggcctttctcccaaagttgcaaatgaggagaatatcaacgttctgaagggacctgaa
tactttggtcaatacggaaagattattaaaattgcaataaataagaaggctgctgcaaat
tctgcaaatggtcatgttggagtttatattacataccaaagaaaagaagatgctgcacga
gcgattgctgcaattgatggcagcgtaagtgatgggcgacatcttcgcgcatcttatggt
accactaaatattgcacttcttatttacggaatcagcaatgccccaatccttcttgcatg
tatttacatgaacccggtgacgaggtggatagttatactaaagaagacttggcatctctt
caacatacccgtcctctttccactaaacctaatgtggtaaatggtgctactcattctcct
tctccttctcttccattcaaaacacctctacttcctgttacgaaaacaccgttagaagag
gctaatagtagtccagctgcacaaaatcagcatattacaacagttgatcatgttcatcca
caagtgtcaatgacaccttccttatccactaataacactgctaccagcgttcctgcccct
tattcttctgctgcttctgtaaacgtcgttcctggacatgcaacaactattcttcatcac
gaagagagttctgctcttccaccaactgctgcttgggcaaaattatctccaagcgtatta
caagaacgattacgtgccgctgttaatcagcaacctttagatgcactgaaatcctcatca
acccagacttcaatacctaaaatccaaaaactgaaagctgcgaaattaccctcggaagaa
gaaaacactacaaagtggcttaacaaagcaattaatgacttggtttcatcgttgagtaaa
atcaattttagcacggaaggaactgaatttgataaaaagcaaatcgaaatgattcagaat
cttcctccgttgtttgtattcaacgcgcgttctgttattgacaaggaggttgtccctgaa
caggaaaaaagcgccgagaatcaacctcctacttctctaggaattaataacggcaaccct
gtaatgcctcctcctggtttccaaagttag
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