Schizosaccharomyces pombe (fission yeast): 2542338
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Entry
2542338 CDS
T00076
Symbol
shd1, SPOM_SPAC16E8.01
Name
(RefSeq) Sla1 family protein Shd1
KO
K20046
actin cytoskeleton-regulatory complex protein SLA1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2542338 (shd1)
Membrane trafficking [BR:
spo04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
2542338 (shd1)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
2542338 (shd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHD1
PH_SLA1
SH3_1
SH3_9
DUF1720
SH3_2
IRS
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
2542338
NCBI-ProteinID:
NP_594213
PomBase:
SPAC16E8.01
SPAC16E8.01.1
UniProt:
O13736
LinkDB
All DBs
Position
I:join(3499049..3499282,3499429..3503457)
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AA seq
1420 aa
AA seq
DB search
MANLPIIGIYKVLYSYEPQEINPGEEIPENEREISIVEDEIVCLLEKGEDDWYLVKRNVN
SNDDDEEIGIVPSNYITEAEPSTKMKALYDYTQQSVDEISFQADQTLDCYGDTDSDWILV
GFNNNFGLAPRNYVEGMDASSAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPA
TSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPP
PPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTNASTRSTGTSSSM
AHSYDSPPSPSSPSDAYGDPNQHLKLRTDSHDDSRAYDSSSSMGNPAYEKWEVREVVGKK
KKRTGILAINNKSIVLTFTKTMDAAQVWPVTDLVNYSSERKHVFIEFNSDSGITSLHLHA
SSNTNADNIIRALGDVAGSARAAGLREIAAASGSPMPKLPSDSALHRLNAASDAAGVNGG
RTGDYEMSTVYGDRSARAEDHKPKDSSAGQKMGTVLYDFIAEAADELTVKANMRVVIVND
TASSDWWKCSVDGKEGVVPSNFIKPDTEGDAKSPPSSSKSGQGSSLSRRASKHESKHKRD
SKHEARPESKHESHRESKSAEKDKKDKKDKKEDSKRSRSHSVSKPDSSKLRTWTDRTGAF
KVEAEFLGYSDDKIHLHKTNGVKISVPSAKMSYKDLDYVELMTGKKVYSRTERKKDTQKQ
SHDHGHSHSKSHDREKEKEKKKDREHRKHRETEEEDEGPPPQPARPESTRPALAPPSSSH
SNDKYDVIQERPKISYDWFDFFLRCGVDFTVCNRYTHNFNNEHLDEACIPSLNPDTLRTL
GLKEGDIIRVMNHVNELNGVSTKPASAITPETKSTVNQIMSGGEALAAPVAVPAPIPAPV
AEPAPPAAPAKEVVEKAPSPPATRPKSTTPQKFDDDAWANKPVTEPPVRASSVTVEPARV
TESMNKMNISEEAKKPEAPSRPRTAPIPEPEEQKKAPVEKKDAEKSVQAPIPAQPTGNIT
IQNAYFTAPQPMAADPFQSPLYVQPTGFQPPPSALPIQPTGYMQPIPVQATGYQPLMVQP
TGLQPHMTGVMPQVTGVMPQMTGVVPQMTGVMPQMTGVQVQKTGAMPQQPVNYGYQVAGM
QPQATGIISQPTGIRAQATGIMTQPTGLHTQATGMMQPTGMQPQATGIMPQATGMMQPTG
MQPQVTGIMPQSMPMQPQMTGVQVQKTGMVAQPMLSQYTGYQQNYTPTAMPAADGYGMQP
SMNDTQAYYNMNAQTPVNYGFAGGQDTSFGYEQQQMYSPMQQQQQQYYGTEMQPDMGYQQ
PMMSNYYDPMQMQQQTPYGYNQTGMEGYSEYGYAQPAGNMANPMSYDPVSNASLYMPSDY
NQQTQPANYYDSSFGGAQGANEAGKKASIYQATPDNPFGF
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttacctataataggcatctataaggtgctgtacagttatgaaccgcaagaa
atcaatccgggtgaagagattccagaaaacgaacgagaaatctcgatcgttgaggatgaa
attgtttgtcttcttgagaaaggtgaagacgattggtatctcgtcaaacggaatgtaaac
agtaatgatgacgatgaagaaattggaatcgttccttcaaattatattactgaggctgaa
ccctcaacaaaaatgaaagctttgtatgattatactcaacaatccgttgatgaaatctcc
tttcaagcggaccaaactttagactgttatggcgacactgattcagattggattttggtt
ggttttaataataatttcggacttgctccgagaaactacgttgaggggatggatgcgtcc
agcgccccggcatctcaggaaccctctgcttctggtgtcaacgctccaacagtgagcgct
cccaactccatggtctctcctccaccttcgtttcaaccgccgagtgctgctgctccagct
acttccttgccctctgactacaaccccccaccaccaccaccacctcctccggcagtggag
gatcaggcggcagacgccaacgagccagatgactactactcctctggcagagccgtgtct
cctgagattcctcccacgtacacgccgaaacaagcagatcctcttccggctcctccccca
ccaccacctccaacacttccaccccaatctactaatacttctcagctacctatgccttcc
cgtaatgtgaataatcttggctcccaagttaatattcctcctccaccggccacccctagt
cagccgccaagacccccaactaatgcgtctactagatctactggcacttcctcttctatg
gctcattcctacgactcccctccttctccttcgtcgccttcagatgcatatggagatcct
aatcagcatctcaaattgcgcaccgattcccacgacgattctcgagcctacgattcctct
tcctccatgggtaatcctgcctacgaaaaatgggaggtccgtgaagtcgttggcaagaaa
aagaaacgcactggtattttagcaatcaacaataagtcaattgttcttacttttactaag
accatggacgctgcccaagtttggcccgttaccgatcttgtaaattattcttctgaacga
aaacatgtttttatcgagtttaatagtgattccggtatcacatctttgcaccttcatgcg
agctctaacactaatgccgacaatattatccgtgcgctaggtgacgtagccggttccgcc
agagccgctggtcttcgagaaatcgctgccgcaagtggaagccctatgcctaaactacct
tcagattctgctttacaccgattaaatgctgctagcgatgcagctggtgtaaacggaggc
cgtaccggcgattatgaaatgtctactgtttacggcgacagaagtgcgcgtgctgaggac
cataagccaaaggattcctcagctggtcaaaaaatgggtactgtgctttacgactttatc
gcggaggctgctgatgagttgactgtgaaagcgaatatgcgagtggtcattgtcaatgac
acagcaagtagcgactggtggaaatgcagtgttgatggtaaagaaggtgttgtacccagc
aactttattaagcccgatacagaaggcgacgcaaagtcacccccttcatcttcgaaatct
ggtcagggatcctcgctttctagaagggcttccaagcacgaatctaaacacaaacgcgac
agtaaacatgaagcaagaccagaaagcaaacatgagtctcaccgtgagagcaagtccgct
gagaaggacaagaaggacaagaaggacaagaaggaggatagcaagcgttcaaggagccat
tcggttagtaaacctgacagcagtaaactgcgtacgtggactgatcgaacaggcgccttt
aaagttgaagccgaatttttgggctatagcgacgacaaaattcatctacacaaaactaat
ggtgtgaaaatatctgttcccagtgcgaagatgtcgtacaaggacctggattacgttgaa
ttaatgactggcaagaaagtttattctcgtacagaaaggaaaaaggatacacagaagcaa
agccatgatcatggccatagtcatagcaagtcgcatgatcgtgagaaggagaaagagaag
aagaaggatagggaacataggaagcacagagagactgaagaggaggatgaaggtccacct
ccccaaccagcccgtcctgaaagtactagacctgctcttgctccaccctcttcctctcat
agcaatgacaaatatgatgtgattcaggaaaggcccaagatctcttatgactggtttgac
tttttccttcgctgcggcgtagattttaccgtttgtaaccgctacacccataactttaac
aatgagcatttggatgaagcatgcataccttctctaaatcctgatacacttagaacattg
ggattaaaggaaggtgatatcattcgtgttatgaatcatgttaatgaactcaatggtgtc
tcaacaaaacctgcatctgccattactccagaaaccaagtccacagtcaaccaaattatg
tccggcggggaggcacttgctgccccagtcgcagtacctgcccccatcccagcgccggtt
gccgaacctgctcctccagcagcacctgccaaggaggtcgttgaaaaagcacctagtcca
ccagcgactcgtccgaagtcaaccacaccccagaaattcgatgatgatgcttgggctaac
aaacctgttacggaaccccctgttcgtgcttcttctgtcactgttgagcctgcacgtgtg
acggaatccatgaacaaaatgaacatttctgaggaagccaagaaacctgaggcgccttca
agacccagaactgcacccatccctgaacctgaggaacaaaagaaagcacctgttgagaaa
aaggatgcggagaagtcggtccaagcacctattccagctcaaccaactggcaatattact
attcaaaatgcatatttcactgctcctcaacccatggctgccgatccatttcaatctcct
ttgtatgtacagccaactggatttcaacctcctcctagcgcacttcctatccaacctaca
ggatatatgcaaccaattcctgttcaggccactggttatcaacctttaatggtacagccc
actggcttacaaccccacatgactggagttatgcctcaggtgactggagttatgccacag
atgactggagttgtgccacaaatgactggagttatgccacaaatgactggtgtacaagtt
cagaagactggggctatgccacagcagcccgtaaactatggttatcaagttgctggtatg
caaccacaagccactggtataatttcgcagcccacgggcatccgtgctcaagctactggt
ataatgacacaacctactggcctgcatactcaagctactggcatgatgcagcctactggt
atgcaacctcaagctactggtatcatgccccaagctactggcatgatgcagcctactggt
atgcaacctcaagtaactggtatcatgcctcaatcaatgcccatgcagcctcagatgact
ggtgtgcaagttcaaaaaactggtatggtcgcacaaccaatgctgtctcaatacactggc
taccagcaaaactatactcctacagccatgcctgctgctgatggttatggcatgcaacca
tccatgaacgatacacaggcatattataacatgaatgcacagacaccggtgaactatgga
tttgctggaggtcaagatacatctttcggttacgagcaacaacaaatgtactcacctatg
caacagcaacagcaacaatactatggtacagaaatgcagcctgatatgggttatcaacaa
ccgatgatgtcgaactattacgatcccatgcaaatgcaacaacagacaccctatggatac
aatcaaaccggaatggagggatattctgaatatggctatgctcaacctgctgggaatatg
gctaaccctatgagttatgatcctgtatcgaatgcttctttatacatgccctccgattat
aatcaacaaacgcagcctgctaattattatgattcatcatttggtggagcgcaaggtgcg
aatgaagctggtaagaaagccagtatatatcaagctactccagacaatccttttggtttt
taa
DBGET
integrated database retrieval system
