Schizosaccharomyces pombe (fission yeast): 2542481
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Entry
2542481 CDS
T00076
Symbol
cbf5, SPOM_SPAC29A4.04C
Name
(RefSeq) pseudouridylate synthase Cbf5
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
2542481 (cbf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2542481 (cbf5)
03032 DNA replication proteins [BR:
spo03032
]
2542481 (cbf5)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
2542481 (cbf5)
Prokaryotic type
2542481 (cbf5)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
2542481 (cbf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
2542481
NCBI-ProteinID:
NP_594878
PomBase:
SPAC29A4.04c
SPAC29A4.04c.1
UniProt:
O14007
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All DBs
Position
I:5140407..5141831
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AA seq
474 aa
AA seq
DB search
MTDTHPGVDFMIKPEATSASKIDTAEWPLLLKNFDKLLVRTGHYTPIPCGNNPLKRPIAE
YVSSGVINLDKPANPSSHEVVAWVKKILRVEKTGHSGTLDPKVTGCLIICNDRATRLVKS
QQSAGKEYVCVLRLHDSVEGERNVASAIETLTGALFQRPPLISAVKRQLRIRSIYESKLI
EFDNERNLAVFWASCEAGTYMRTLCVHLGLLLGVGGHMQELRRVRSGCLSENDDIVTMHD
VLDAQWIYDNTRDESYLRRVIRPLESLLVGYKRIVVKDSAVNAICYGAKLMIPGLLRYEA
GIEVNEEIVLITTKGEAIAVGIAQMSTVELSTCDHGVVAKVKRCIMERDVYPRRWGLGPQ
SMKKKTLKKEGKLDKYGRPNENTPADWSKSYIDYSDPNAEVAKPAPVVAPAAPTVEAEVN
GVEDSKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKKKSE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacggacactcatccaggagttgattttatgatcaagcctgaggctacttctgcttct
aaaattgataccgctgagtggccattgctcttgaaaaactttgacaagttgctcgttcgt
actggtcattatacacctattccctgtggtaataaccctttgaaacgtccaattgcggaa
tatgtttcttcaggtgtcatcaatttagacaaaccggctaatccatcttctcatgaggtt
gttgcctgggttaaaaaaattcttcgtgttgaaaaaactggtcacagtggaactttggat
cccaaagttaccggatgtttgatcatttgcaatgacagagccacccgtttggtcaaatct
cagcagagtgccggtaaagagtacgtttgcgttttacgtcttcacgactcagttgagggt
gagcgtaatgttgcttctgccatcgagactcttaccggtgctttgtttcagcgtcctcct
ttaatttcagctgtcaagcgtcagttgcgtattcgtagtatctatgaatccaagttgatt
gagtttgacaatgagagaaaccttgccgttttttgggctagctgtgaagcaggtacttac
atgcgtactctttgcgtacatctcggtcttcttcttggtgttggaggccatatgcaagaa
cttcgtcgtgttcgttctggttgcctttcggaaaatgatgatattgtcaccatgcacgat
gtcttagatgctcaatggatttatgataacactcgtgatgaatcttatttacgtcgtgtt
atccgtccattggaatctctcctcgtaggctataagagaattgtggtaaaggatagtgcc
gtcaatgccatttgctatggtgcaaaacttatgatacctggtttacttcgttacgaagct
ggtattgaagttaacgaagagattgtccttattactaccaagggtgaagctatcgctgtg
ggtattgcacaaatgtctaccgtcgagctttcgacttgtgatcatggtgttgttgccaag
gttaagcgttgtattatggagagagatgtgtatcctagacgttggggtttgggccctcaa
agtatgaaaaagaaaactttgaagaaagaaggaaaacttgataaatacggacgtcctaat
gaaaacacacccgcggattggtctaaatcttatattgactactctgatcctaatgcagag
gttgcaaagcctgctccagttgttgcgcctgcagcacctactgttgaagctgaagtcaat
ggagtcgaagacagcaagaagcgcaaatcggtagaatcatctgagaaggatgaggatgaa
gctgctaagaaagaggaaaaacggcggaaaaaggaagctaagaaggagaagaaggaaaag
aaggagaaaaaagaaaaaaaggagaagaagaagaagtctgagtaa
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