Schizosaccharomyces pombe (fission yeast): 2542545
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Entry
2542545 CDS
T00076
Symbol
rsd1, SPOM_SPAC19G12.07C
Name
(RefSeq) RNA-binding protein Rsd1
KO
K13091
RNA-binding protein 23/39
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spo03041
]
2542545 (rsd1)
Spliceosome [BR:
spo03041
]
Common components
Common spliceosomal components
General mRNP proteins
2542545 (rsd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
2542545
NCBI-ProteinID:
NP_594422
PomBase:
SPAC19G12.07c
SPAC19G12.07c.1
UniProt:
O13845
LinkDB
All DBs
Position
I:complement(join(4053810..4054068,4054110..4054184,4054234..4054554,4054627..4054800,4054848..4054985,4055082..4055872,4055964..4056017))
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AA seq
603 aa
AA seq
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MQLDAEALAEAPFRKQEVPQNQENQQKASSSFHESSLTSSTHSHPSNPPPPPTRLHDRSF
KPVSKNYESEGRLTPPPVSMGYRYARSSKQSFQREDSGYNDDVVTNSSSHRTPRHHRRSY
SPRSDYGSRSPSPHSSVDSHQSRSPVRSRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPY
SSRHSRSRRRYEERSSRSSRAHDYDYEDLRDDDRSHERKRSRSRPRERSSKLSEEERDRR
TVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAIAL
SGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPFHRLCVSNIHFNLTDEDVKAIF
EPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRVCLGNDKFT
TETTSSMLKRFDETLARQERSQPSQRNGGSSTYESQDYREAAPLSPTEEESRPITRDELM
KKLARSEDISDNSKLVSEPEPPIRSRCALLENMFNPAEETSPNWVQELEQDVKEECDEKY
GKVVHIAVVPNELGQIFVKFENADFAEKAITGLHQRWFGGRTIKASILPETDYYFKFPNA
KTA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggacgcggaagccttggctgaggctccttttcgtaagcaagaagtgccgcaa
aatcaagaaaatcagcaaaaggcatcttcttcttttcatgaatcctcactcacctcttcc
actcatagtcatccctctaaccctcctccaccgcctacacggttgcatgatcgctctttc
aaacccgtgtctaaaaattacgaaagtgaaggtcgtctaactcctcctcccgtttcaatg
ggttatcggtacgccagatcttccaaacaatcttttcaacgagaggatagcggttataac
gatgatgtagttacaaattcctcaagtcatcgcaccccaagacaccataggagatcatat
agtccaaggtccgattatggtagtcgctctccctctcctcactcttctgtagattctcat
caaagtagatcacccgttcgttctcgcgatcgcgatcgcagttcaaggtcaagtcgaagc
cgccatccctcaagtcgtagtcgccatcgatacgatgattattcacgcagccctccttac
tcttcgcggcatagtcgtagtcgtcgccgctatgaagaacgctcctctcgttcttctaga
gcccatgattatgattatgaggacttgagggatgatgaccgttcacatgagcgtaagaga
agtcgttcccgtcctcgtgaacgctcctctaaactttcagaggaagagcgtgatcgccgt
actgtgttcgtttctcaactcgcaaatcgtttgacttctagggaattatatgattttttc
gaacaagctggtcctgttcgcgatgctcaaattgttcgagacaagattagcggacgatcg
aaaggtgttgcatatgtggagttctgtcacgaggattctgtacaggcggctattgcgctt
tctggtaagcgattgttgggtcttcctgtcattgtacaacttacagaggctgaaaaaaat
agaaaagctcgtgaagctgctgaattggcacgagccgctagcgctgaaattccatttcac
agattgtgtgtctcaaacattcacttcaaccttactgatgaagatgttaaggcaattttc
gaaccttttggcgacatagaatttgtacaccttcagcgtgatgatcaaaaccgaagcaag
ggttttggttatatacaatatcgaaatcctataagtgcgagaaatgctttggagaaaatg
aatggctttgatttagccggaagaaatatgagggtttgtttgggcaatgataaatttact
acagaaacaactagttccatgctgaagcgctttgacgaaacgttggctcgccaagaacgt
agtcaaccttctcaacgtaatggcggttcatcaacctacgaatcacaagactatcgagaa
gcagctcctttatctcctactgaagaagaaagccgtcccattacaagagatgagctaatg
aaaaagttagcacgctctgaagacatttcagacaacagtaaactggtatctgaaccagag
cctccaattcgtagtagatgtgcattattagaaaacatgtttaatcctgctgaggaaaca
tcacctaattgggtgcaagaattggagcaggacgtcaaagaagagtgtgatgaaaagtac
ggcaaagtagttcacattgctgttgtaccgaatgaattggggcagatatttgtaaaattt
gaaaatgccgattttgctgaaaaggcaatcactggactccatcaacgttggttcggaggg
cgtacaataaaggcatccattttaccggaaacggattactacttcaaattccctaatgcc
aaaactgcttaa
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