Schizosaccharomyces pombe (fission yeast): 2542564
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Entry
2542564 CDS
T00076
Symbol
ckb1, SPOM_SPAC1851.03
Name
(RefSeq) CK2 family regulatory subunit Ckb1
KO
K03115
casein kinase II subunit beta
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03008
Ribosome biogenesis in eukaryotes
spo03083
Polycomb repressive complex
spo04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
2542564 (ckb1)
09126 Chromosome
03083 Polycomb repressive complex
2542564 (ckb1)
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
2542564 (ckb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2542564 (ckb1)
03036 Chromosome and associated proteins [BR:
spo03036
]
2542564 (ckb1)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
90S particles
Kinase
2542564 (ckb1)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
2542564 (ckb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CK_II_beta
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-GeneID:
2542564
NCBI-ProteinID:
NP_001342935
PomBase:
SPAC1851.03
SPAC1851.03.1
LinkDB
All DBs
Position
I:join(4502408..4502430,4502510..4502789,4502995..4503387)
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AA seq
231 aa
AA seq
DB search
MQLYSSESESDDSQYWVDWFLGLKGNEFFCEVDEDFIQDRFNLTGLSHEVPHYSQSLDLI
LDVLDPDLPEEVQDEVEASARHLYGLIHARYILTAQGLYKMLEKYKKCDFGHCPRVLCNG
QPMLPVGLSDIAHTKSVKLYCPRCEDVYTPKSQRHASIDGAYFGTSFPHMLFQVYPELAV
PKSQERYIPRIFGFKVHSYSATFKKQDVYKEKQKKRLQGAEAESKNKLAIT
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcagctatactcttcggaaagtgaatccgatgattctcaatattgggttgattggttt
ttaggactaaaaggaaacgaatttttttgcgaagtcgacgaagacttcatccaggatcgc
tttaatttgactggattgagtcatgaagttccacactactcccagtctttagacctcatt
ttagatgtattggatcctgatttaccagaggaagtacaagatgaggtagaagctagtgct
cgtcatttgtacggccttattcacgcccgttatatcttaacggctcagggtttatataaa
atgcttgagaaatacaaaaaatgtgactttgggcattgccctagagttttatgcaacgga
cagccaatgttgcccgtcggcttgtcggatattgcccatacaaaatccgttaaattatac
tgtcctcggtgtgaggatgtgtacacaccaaaatcacaaagacatgcatccattgatggt
gcatattttggaacctcattccctcacatgctttttcaggtataccctgaacttgcggtc
cctaaatctcaagaacgctacattccacgtatttttggtttcaaagtacatagctattct
gctacctttaaaaaacaagatgtatacaaagaaaagcaaaaaaagcgtttacagggagcc
gaagctgaatcaaaaaataaactggcaataacttaa
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integrated database retrieval system
