Schizosaccharomyces pombe (fission yeast): 2542638
Help
Entry
2542638 CDS
T00076
Symbol
snf21, SPOM_SPAC1250.01
Name
(RefSeq) RSC-type complex ATPase Snf21
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2542638 (snf21)
03036 Chromosome and associated proteins [BR:
spo03036
]
2542638 (snf21)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
2542638 (snf21)
RSC complex
2542638 (snf21)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
2542638 (snf21)
SWI/SNF complex
2542638 (snf21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
Bromodomain
ResIII
SnAC
DEAD
HDA2-3
QLQ
Motif
Other DBs
NCBI-GeneID:
2542638
NCBI-ProteinID:
NP_594861
PomBase:
SPAC1250.01
SPAC1250.01.1
UniProt:
Q9UTN6
LinkDB
All DBs
Position
I:complement(join(5100376..5103924,5103966..5104016))
Genome browser
AA seq
1199 aa
AA seq
DB search
MRAEKQYTRNEVEETIVRWKKLKESGATEHDNTEYAQLCDVLRSAQSEIEARRDLKGHIK
RCFSSVDKNTEKLILKQQVLAYKKLSQNLPAPDDCILSVLLRLSKDEQLLQSIVKQPLQN
SKVDGKVRRDFGSCQITPSAKQQRKYLQYQISEDDAIKNRMFRRMSDLESYPAVMRDVAE
LKDDNERLNLDTIKRNALVELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVERMSCRRPK
LVPQATRLTEVLERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAV
LAYHSHIEKEEQRRAERNAKQRLQALKENDEEAYLKLIDQAKDTRITHLLRQTDHYLDSL
AAAVKVQQSQFGESAYDEDMDRRMNPEDDRKIDYYNVAHNIREVVTEQPSILVGGKLKEY
QLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTN
WTMEFERWAPSIVKIVYKGPPQVRKALHPQVRHSNFQVLLTTYEYIIKDRPLLSRIKWIY
MIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIK
SFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKV
IRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERS
IDPTGFNYDMLWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYL
RLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDL
QAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAGKFDNKSTPEERE
AFLRSLLENENGEEENDEKGELDDDELNEILARGDDELRLFKQMTEDLERESPYGKNKEK
ERLIQVSELPEFYQREEPEKTTDLLQEEPLGRGARRRTPVVYDEAVRDAQWMAEMDMESE
ARPTRGRPKRNIASVDETPALTLNGKPKKKRGPAPDTLTSEHRSLLRRVCLEIYKAVNEL
EDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDLMTMF
NNARTYNEEGSFVYEDANKMQTAMETKIEELEEDGTLATLRGMEAEATSQLEDRIENEA
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcagagaagcaatacacgagaaatgaagtggaagaaacaattgtgcgatggaag
aaattgaaagagtctggcgctactgagcacgataatacggaatatgctcaattgtgtgat
gttttgcgatcagcacagtcagaaattgaagcacggagggatttaaaaggacacattaaa
aggtgtttctcttccgtagataagaatacggagaaactgattttgaaacaacaagttttg
gcttacaaaaagctttctcaaaatcttccagcacccgacgactgtatactatctgtgtta
cttaggctttccaaagatgagcaattgcttcagagtatagttaaacagcctttacagaac
tctaaagtcgatgggaaggtgcgacgcgattttggctcttgtcaaataacaccatcagca
aagcagcaaagaaaatacttgcaatatcaaatttcggaagatgatgctataaagaatagg
atgttccgacgaatgtcggatttggaaagctatccggctgtgatgcgggatgttgcagaa
ttaaaagatgacaacgaacgtttaaacttggatactatcaaacgtaatgcgctagttgaa
ttgaagaaattacgactcatcaaacagcaagaatctcttcgccatcaagtgatgcattgc
caaccgcatttacgtaccatagttaatgccgtagaacgcatgtcatgccgccgtcctaag
ctagttcctcaagctacacgcctgactgaagtattagagcgccagcaaagaagtgatcgc
gaaagaaggttaaagcaaaaacagtgcgattatctgcaaactgtatgtgcccatggtcga
gagattaatgtccgaaccaagaatgctcaggcaagggctcagaaagcgaatcgcgctgta
ttggcgtatcattcgcatatcgaaaaagaagaacagcgtcgtgctgaacgcaatgcaaag
caaagattacaagccttgaaggagaatgatgaggaggcctacttgaaacttattgatcaa
gcgaaggatacaagaattactcatttattacggcaaactgatcattacttggattccttg
gcggctgctgttaaagtacaacagtctcaatttggtgaatcggcctatgacgaagatatg
gatcgccgaatgaatcctgaagacgatagaaagattgattattataatgttgctcataat
attcgtgaagtcgtcactgaacagccttctattttagtaggaggaaagctgaaggaatat
caactacgtggtttgcaatggatgatttcactgtataataatcatttgaacggtattctt
gctgatgaaatgggcttaggtaaaactattcagacaatctctcttattacccacttaatc
gagaaaaaacggcagaatgggccatttttggtaattgttcctttatcgaccttaacaaat
tggaccatggaatttgaaagatgggcgccatcaattgtaaagattgtttacaaaggacct
ccacaagttcgaaaagctttgcatcctcaagttcgtcactctaatttccaagttcttttg
acgacatacgagtatatcataaaagatcgaccacttttaagtcgtattaaatggatttat
atgatcattgatgaaggacatcgtatgaaaaacacacaatccaagttaacaaatacttta
actacctattattcatcacgttatcgtcttatccttacaggaactcctttacaaaacaat
cttccggaactttgggctttgcttaattttgtattaccacggatttttaattccattaaa
agttttgatgagtggttcaatactccttttgctaatacaggcgggcaggataagatggaa
cttacagaagaagaatctttgcttgtcattcgccgtcttcacaaggtcttacgtcctttt
cttttgcgacgtcttaaaaaggatgttgaagccgagcttcctgataaagttgagaaggtt
attcgttgtcagatgtcggggcttcagcaaaagctctattatcaaatgaagaagcatgga
atgttgtatgtggaagatgctaaacgcggtaaaactggtatcaaaggcttacagaatacg
gtcatgcagttgaagaaaatctgtaatcatccttttgtgtttgaagacgtggaacgttca
attgatccaacaggatttaactatgatatgttgtggagagtttctggcaaattcgaactg
ttagaccgtattttgcctaaactgtttcgttctggtcatcgtatattaatgtttttccaa
atgactcaaattatgaatatcatggaggattacctgcattatcgtcagtggagatatctg
cggcttgatgggtctaccaaagctgatgatcgttcaaagttattgggagtatttaatgat
ccgactgctgaagtaaatttgtttttgttaagtactcgtgctggtggacttgggcttaat
cttcaaactgctgatactgtaataattttcgactcggattggaacccacatcaagatttg
caggcacaagatcgtgctcatcgtattggacaaaccaaagaggttagaatttatcgactg
attactgaaaaatcggtagaggaaaacattcttgctagagcccaatataaattggacatt
gatggcaaagttattcaagcaggaaaatttgacaacaagtcaacaccagaggaacgtgag
gcgtttttgcgttcgctcttggagaacgaaaacggtgaagaagaaaatgatgagaagggc
gagttagatgacgatgaactcaatgagatacttgcccgaggtgacgatgagttgcgactt
ttcaaacaaatgactgaagatttggagagggaatcgccatatggtaagaataaagaaaaa
gaaagactcatccaagtaagtgagcttcctgaattttaccaaagggaagaacctgagaaa
accaccgacttgttgcaggaagaaccactcggtagaggagcccgcagacgtaccccagtt
gtatatgacgaagcagtacgagatgctcagtggatggcagaaatggatatggaatctgaa
gctcgtccaactcgtggtcgcccaaagcgtaatatagcgagtgttgacgaaacacctgct
cttacactcaatggaaagccaaagaagaaacgtggaccggctccggatacacttacttca
gagcaccgttcgctacttcgtcgtgtgtgccttgaaatatacaaggccgttaatgagctt
gaagatgataatggtcgtcctctgaataaactatttttggagcttcctagtaagaagtta
tatcctgattattacatgataattaaatcccctatcgcacttgatgcaattagaaagcat
atcaatggcactttctataaaactttagaagctatgaaatcggatcttatgacaatgttt
aataatgctaggacgtataatgaggaaggttcttttgtctatgaagatgcgaacaaaatg
caaacggctatggaaaccaaaattgaagaactggaagaggatggcacattagcaacgctt
cgcggaatggaggcggaggctacatcgcaattggaagacagaattgaaaatgaggcttga
DBGET
integrated database retrieval system
