Schizosaccharomyces pombe (fission yeast): 2542657
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Entry
2542657 CDS
T00076
Symbol
mis4, SPOM_SPAC31A2.05C
Name
(RefSeq) adherin Mis4
KO
K06672
cohesin loading factor subunit SCC2
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
2542657 (mis4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spo03036
]
2542657 (mis4)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
2542657 (mis4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
2542657
NCBI-ProteinID:
NP_592917
PomBase:
SPAC31A2.05c
SPAC31A2.05c.1
UniProt:
Q09725
Structure
PDB
PDBj
LinkDB
All DBs
Position
I:complement(join(391838..391915,391956..392612,392652..392787,392828..394611,394656..395123,395167..396502,396546..396741,396781..396889))
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AA seq
1587 aa
AA seq
DB search
MLFEMTPETFKKVNSSNRIIKGLQYTPLASSIPLENGLQNVLYPSSKFQNEPLQLNSEES
SIMQRYVDMLNPGATFVNDSETFNFYKNALSAMITEPAMPAMRVNASPVLDQKVCNSDSL
SELNDFTKSLIQPSMLMCEPKEKPDASSINTNRSSSDNGFLTPSSSPRSPSCSRVFNAVQ
LCSPKKSKDDITTPKKRLMEDTYSPRESPSKIQRLQDVLLKQLQDTRLLISQVIEAENSE
DFSSNSLFIKREDDDGKHISSHAIEKLYMALTKLSRLGACDKLLEEGSIILVKQILEKEL
KELPVACYSIINLHDSLTQFPNLDFILKTTALVLFIIFLVPSFKKLQNEESILHLLNILH
SIFEYTVPEAIDNIVQSKTSDARTSEIQHLSVLLQKVANVLNILSKVAHEIPLSEAVVIR
IVYLFPKVSTLDNSFKTKLPNCNSSSFDFLKAPLFQTLQYLFRLYPYQRDFIIEESLTNF
SHLPTARSVSRTYRLSNGKSIQYYSTLFVRLIQSCSIQNLFDSEIVQSESKSTEALHSGN
LTEHLKTVESILSKSRHEEYRIANHIVAYLLSRSLKQNKTESDNSFAILTKILLEDLLNM
LSLPEWCGTETIIRQFAMNLVMTVTNDKQAVSSKNAALDLISLIVNKVLALFDLSLFEKH
NIPAPTNFNDIISFIPSITRLNELSQVSFNHFYFLCKGDISLENILPYNYNKWFSFLLQL
RKVCNDSEALKIIDNCIDKNMQKSQEGFQGPSPFKADENDEDIFIISLYHSSLFLNLKFF
VSLIIGFLDSPQASLRTKCLRIINQMKTIPSILRTHPEVLAQIISKSNDQSAIVRDTVLD
LLGTYIMAYRETIPQIYGCIISGISDPSTIVRKRAIKQLCEVYEATEDLNIRVDIASKLL
TRSNDEEETISELSLEVLEKLWFSPASNELDCQKGYEQLTFLEKQKLRVQYFPILKLCAE
PSTERHVLLVTSLKTMLTSKEEINLSTLHTQIRLLLSCLFNQLIEVVTEDQVDESTKGIL
YEIMSTLFVFSRAFPFLFDLSYLHLLKPYLRSASTIEEQRFLYYVVAIFRQVLPFQKEIS
ESFLRSLESVLLQRLTKAGTATLMEIVPCLCSLFTRLNDYERLKKIVVSCLKSLEEARHS
ENNFQKMVRLIDLIGLFSRYGDLNRINDDWKHSLDFISPECDDAYVILLGYFQKLLKDAK
GQLRIHIIDNMSRICLRETSLFISPLMLSTLDMIIAENNVNEVSVLFKSFLELLAADEDL
IFEADQKLSLKGKQNVQSNKSVDRDMLKGTKDKQWIEGVSASLMQHFLPCILDSCFSKNL
RYSMLGIEILKCIIHQGLVNPRMCFSTIIALESNAIKETREVAILLHTELHRRHESLIDG
LYAQSADLIFSLQKTEEYQTFKLGEFSPFQSAYTIVSADKSSKSRKKLIMQILKPLKLDG
IDLPSFTEEKVSFVSFCCVCLAGIPYVSIEEPLMIISTVDSVLATIGPTITGWMKKLDHE
RFKILAGINLCNLIYLKRYIKYAFSISDSSRPIREKKPLTLLNRGYVDLITSDAKPDIVS
KLVIKLFEEENILSGEDQVEGEQLTVV
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcgagatgacacctgaaacctttaaaaaagttaactcctctaatcgaattatt
aaagggcttcaatacacaccattagcatcatcaatcccattggaaaatggtttacaaaac
gtattatatccatcttctaaatttcaaaatgagccattgcaacttaactccgaagaatca
agtattatgcaaagatatgtggatatgctaaatcctggcgcaacattcgttaacgattct
gaaacctttaatttttataaaaatgctcttagcgctatgataacggaacctgcaatgccc
gcaatgagggtgaatgccagtccggtcctagaccaaaaggtgtgtaacagtgactcgtta
agtgaattaaatgattttacaaaatctctgattcagccaagtatgttgatgtgtgaaccc
aaggagaaacctgatgcttcttctataaatacaaaccgttcatcttccgacaatggcttc
ttaactccgtcttcaagtcctcgaagtccatcatgttctcgcgtatttaacgctgttcaa
ttatgtagccctaaaaaatctaaagatgatattactaccccaaaaaagcgacttatggaa
gacacttattcgcctcgtgaatctccctcaaagatccagcggttgcaggacgttttgtta
aagcagttgcaagataccagattactaatttctcaagttatagaagctgagaattcggaa
gatttttcatcgaattctctctttattaaacgagaagacgatgatggaaaacacatttca
tcgcacgcaattgaaaagctatatatggcattaaccaagcttagtcgtttgggagcttgt
gacaaattgctggaagaagggagtataatacttgtaaaacaaatccttgagaaagagtta
aaagagcttcctgtcgcttgttacagtataattaatcttcatgacagcctcacacaattt
ccgaatttagactttattttaaagaccactgctcttgttctttttataatatttctggtc
ccctcctttaaaaagcttcaaaatgaagaatcaattcttcatttacttaatatcttacat
tccatatttgagtacacagttcctgaagcgattgataacatcgttcaatcaaaaacttcc
gatgctaggacttctgaaattcaacatctatcagttttgttacaaaaagtcgcaaatgta
ttaaacatcttatctaaagttgcccatgaaattcccttgtcggaagctgtggtcatacgc
attgtatatttatttcccaaagtctctacactcgacaattccttcaaaactaaacttcct
aactgtaacagctcatccttcgattttcttaaagctcctttatttcaaacgttacaatat
ttatttcgtctttatccttatcagcgagattttatcattgaagaatcacttacaaatttt
tctcacttgcccactgctcgttcggtctcaaggacctatagactctctaacggtaaatcc
atacaatactattcaaccctatttgtacgtttaattcagtcatgctccattcaaaactta
ttcgactcagaaattgtacaatcggagagcaaatccactgaagctttacactcaggtaac
ttaacagaacatctgaaaacagtcgaatcaatactatccaagtctcgacatgaagaatac
cggatagctaatcatattgttgcttatttgcttagtcgttctttaaaacagaataaaacg
gagagtgacaactcatttgcaattttaaccaaaatccttttagaagatttattaaacatg
ctttctttgcctgaatggtgcggaaccgaaacaattattcggcaatttgcaatgaattta
gttatgactgtgactaacgacaaacaagcagtttcttcaaagaatgctgcgctggatctt
ataagtctcatcgttaacaaggttttggcattgtttgatctttcccttttcgagaagcac
aatatcccagctcctacgaatttcaatgatataatatcgttcattccctcaattactaga
ttaaatgaactttctcaagttagctttaaccatttttactttttatgcaaaggtgacata
tctctggaaaacatactcccttataactacaataaatggttttcatttctcttacagctt
agaaaagtatgcaatgactccgaagctttaaaaattattgataattgtatcgataagaat
atgcaaaagtctcaagaggggtttcaaggtccttcaccatttaaagcagatgaaaatgac
gaagatattttcattatatccctttatcattcttctttgtttttaaatttaaagtttttt
gtctcgctcattataggctttctcgatagtcctcaagctagtcttcgaactaaatgcctt
cgaatcatcaatcaaatgaaaactataccttctatattaagaacacatccagaagttttg
gctcagataatatcaaaatcgaatgatcagtctgcgatagttcgagatactgtgttagac
ttacttggcacatatatcatggcatatcgggagacaattcctcaaatatatggttgtata
atttctggaatttcggatccttcaacaatcgttcgtaaacgcgctataaagcaactatgt
gaggtttatgaagctaccgaagatttaaatatccgtgttgacatagcttcaaaactttta
acccggagtaatgatgaagaggaaacaatcagtgaattaagccttgaggttttagaaaaa
ctttggttttcacccgcaagcaatgaattagattgtcaaaaaggctatgagcaattaact
ttcttagaaaagcagaagttaagagttcagtattttcctattttaaaactatgtgctgaa
ccatcaaccgaaagacacgtcctgttggtaacgtctctgaaaaccatgttgacttctaag
gaagagatcaatttgagtacactacacactcaaattcgacttcttctctcttgtcttttc
aatcagctaatagaagttgtaaccgaagatcaagttgatgaatcaacaaagggaatttta
tacgaaataatgagtacattgtttgttttttcacgcgcttttcccttcctctttgacttg
tcttatctacacctcttaaaaccctatttacgatctgcttcaactattgaagagcaacgt
tttctttactatgtagtagctatttttagacaggttttaccatttcaaaaagaaatttct
gaaagcttcctacggagccttgaatctgtgttactgcaaaggcttactaaagccggtact
gcaacgttaatggaaatagttccttgtctttgcagcctatttacaagacttaatgattat
gaaaggttaaagaaaattgtggtttcgtgtcttaaatctttagaggaggcacgacactca
gaaaacaattttcaaaaaatggttcgcttaatagacctcattgggcttttttctagatat
ggggatctcaatagaataaatgatgattggaaacattcacttgattttattagtcctgag
tgtgatgatgcttacgttatactattaggttattttcagaaacttctaaaagatgcgaaa
ggtcagctgagaattcacataattgataacatgagcagaatatgtttaagagaaacatct
ttgtttatatctcctcttatgttatcaactttggatatgataattgcggaaaataatgtt
aacgaagtatctgttttgtttaaatcttttcttgagcttttggccgcggatgaggatctt
atctttgaagcagatcaaaagctaagtttaaagggtaagcaaaacgttcagtccaacaaa
tcagttgatcgagatatgcttaaaggaactaaggataaacaatggattgaaggagtcagt
gcatctttaatgcagcatttccttccctgtattcttgactcttgcttttcaaaaaattta
aggtattcaatgctcggaattgaaattctcaaatgtattattcatcaaggactagtaaac
ccacgcatgtgtttctcaaccataatagcactcgaatccaatgcaattaaagaaaccaga
gaagtagcaattttgcttcacactgaattgcaccgaagacatgaatctttgatagatggc
ttatatgctcaatctgcagatttaatattttcccttcaaaaaacggaggaatatcaaaca
tttaagttaggcgaattttcgccgttccaaagtgcctataccattgtctccgctgataaa
agttcaaaatctaggaaaaaattaataatgcaaatattaaaacctcttaaactcgacggg
attgatttacccagctttacagaagaaaaagtttcatttgtaagcttttgctgtgtatgt
ctggcaggaattccatacgtgtcaatagaggaaccgttaatgatcatttcaacagttgat
tcggtgctcgcgacgataggccctactattactgggtggatgaaaaaactagatcatgaa
cgttttaaaatccttgcaggtatcaacttgtgcaatttgatatatcttaagagatatata
aaatacgcattttcaatttcagactcatctcgacctatacgtgagaaaaagcctctaact
cttttgaatagaggttatgtggatttaattacttctgatgctaagccagatattgtttct
aagttggtgataaaattgtttgaagaagaaaatatcctttctggcgaggatcaagttgaa
ggggaacagcttacagttgtctaa
DBGET
integrated database retrieval system
