Schizosaccharomyces pombe (fission yeast): 2542668
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Entry
2542668 CDS
T00076
Symbol
nsp1, SPOM_SPAC26A3.15C
Name
(RefSeq) nucleoporin Nsp1
KO
K14306
nuclear pore complex protein Nup62
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2542668 (nsp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2542668 (nsp1)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
2542668 (nsp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
DUF16
Med21
Motif
Other DBs
NCBI-GeneID:
2542668
NCBI-ProteinID:
NP_594158
PomBase:
SPAC26A3.15c
SPAC26A3.15c.1
UniProt:
Q10168
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Position
I:complement(join(3367657..3369449,3369516..3369519))
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AA seq
598 aa
AA seq
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MSFNPGNNQNSGFSFGKPAQPNSAAQGAATPAATGLFGNTNNNTSSTAPSGGLFGSNNAS
NTSAPSTFSFGKAATTGNSTNASTSSPFSFGSTNTNNTAGAKPLFGGLGSTGSANSTGDK
SKNTASSATGAATTNPSGSTFNFGSSNNSFNFGKPASTTNTTTPAAASTGSLFGKPAATG
TTSNAPPASSTSTTPATGSGGFSFGKPASLGSTNNASTSTTANSGFSFGKPATTSAPGSN
TTVTPSSSITGTNDSKPAASNTGSAPTTGFSFGKPAGQAASTATDKGTTTTSSAGTGFSF
GKPATTEDTNKPTAPNSAFTKPATSTGDNKPTFSFGNTSKPTENTSTTATSAPPLSNNTK
PAEGANQTSSGFSFGKPATDTTTSTSKTGPLFGNKPADPSAKPGATASTTPSEPPPSSIK
HKTLQEILNKWSTDLTTQTEVFNKLCDQVSDWDRTLVDNGALISKLYTETVEAEQMSNRI
DDGLEYVSSSQQELFKLLDSYETQLETFDGRATSALNVERERAFGVADDILSRLDRLGED
LGTVINQMNDFSKPDDSISEIVKVLNAQLASLGWVENRIFQMEEKLDTIKKKNSDVLF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaacccaggtaataaccagaattcagggttttcatttgggaaacctgcgcag
ccgaattcagctgcgcaaggagcagcaactcctgcggcgactggcttgtttggaaacaca
aataataatacctcttctacagcgccgtctggaggcttatttggttctaataacgcgagt
aacaccagtgctcccagtaccttttcttttggtaaagcagcgactacaggcaactcaaca
aatgcatcaacgagttcacctttttcgtttgggtctactaataccaacaatactgctggg
gctaaacctcttttcggaggtttaggaagtaccgggtctgctaactctactggtgataaa
agtaaaaacaccgcttcttctgctacaggtgcagcaactactaatccttcaggtagtact
tttaattttggaagttcaaataattcttttaatttcggtaaacccgcttctacgactaat
acgacgactccggcagccgctagtactggttctttgtttgggaagcctgctgctacaggg
actacaagcaatgcccctccagcttcttctacttctacgacacctgctactggaagcgga
ggttttagctttggaaaacctgctagtttaggctctactaataatgcatccacttcaacc
actgctaattcaggctttagcttcggaaagcctgcaactacttcagctccaggatctaac
actactgtcacccccagtagctccattacgggaaccaatgactcaaagcctgctgcatct
aacactggttctgctccaactactggtttctcttttggtaagcctgcgggccaagcagct
tcaaccgcaacggacaaaggtactaccaccacatcttcagctggtactggatttagtttt
ggaaaacctgcaactacagaggatactaataaacctactgctcccaactcagcttttaca
aaaccggctacttcaactggtgataataagccaacattttcttttggaaacacttcaaaa
cctacggaaaatactagcacaacagcaacttcagctccgccactttcgaacaatacgaaa
cctgcagaaggtgcgaatcagactagctctggattttcatttggtaaacctgcaactgat
actacaacatctacttcaaaaaccggtcccctttttggtaataaacctgccgatcccagc
gccaagccgggcgctactgcctccactactccttctgagcctcctccatcttctatcaaa
cacaaaactcttcaggaaatccttaataaatggtctactgatttgactacgcaaactgaa
gtttttaataagctttgtgaccaggtttctgactgggatagaactttagtagacaatggt
gctttaatatcgaaattatacactgaaactgttgaagcagaacagatgtcaaaccgcatt
gatgacggattggaatatgtatcttccagccagcaagagctatttaaattgctggattct
tatgaaactcagttggagacctttgatggtcgtgcaacttcagcacttaacgtcgaacgt
gagcgcgcttttggtgttgctgatgatattttgagtagattggatcgattgggtgaagac
cttggtactgtcataaaccaaatgaatgatttttctaaacccgatgattcaatttccgaa
attgtgaaggttttgaatgcacagttggcaagtctcggatgggttgaaaatagaatattt
caaatggaagaaaagttggatacaataaaaaaaaagaattctgacgttttgttctaa
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