Schizosaccharomyces pombe (fission yeast): 2542757
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Entry
2542757 CDS
T00076
Symbol
mre11, SPOM_SPAC13C5.07
Name
(RefSeq) Mre11 nuclease
KO
K10865
double-strand break repair protein MRE11
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03440
Homologous recombination
spo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
2542757 (mre11)
03450 Non-homologous end-joining
2542757 (mre11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2542757 (mre11)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2542757 (mre11)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
2542757 (mre11)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
2542757 (mre11)
BRCA1-C complex
2542757 (mre11)
NHEJ (non-homologous end-joining)
MRX complex
2542757 (mre11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
2542757
NCBI-ProteinID:
NP_592935
PomBase:
SPAC13C5.07
SPAC13C5.07.1
UniProt:
Q09683
Structure
PDB
PDBj
LinkDB
All DBs
Position
I:join(436214..436381,436430..436935,437006..437580,437624..437807,437853..438369)
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AA seq
649 aa
AA seq
DB search
MPNDPSDMNNELHNENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMI
LLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPN
INVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTK
LALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLPESFIQ
DFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFH
LEKIRLRTVRPFIMKDIILSEVSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGT
VPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVANATDVVQFYLKKKYTRSKR
NDGLYTSAVEDIKINSLRVESLVNEYLKTNRLECLPEDSLGEAVVNFVEKDDRDAIKECV
ETQLNKQINLLVKKRVTEENLEQEISSIINDLPKISTTKRKDYEELPEEVSETSINIAEH
TPVLKHTSSLLDHHSPLATSSSEHEMEATPSPALLKKTNKRRELPSSLTKKNTRTPQRSK
EVKKVPARKLSQSTKKSDKNTQSTLLFYDPSSTTEAQYLDNEDDEILDD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgacccctcagatatgaataatgaacttcataatgaaaatactattagaatc
ttaatatcttctgacccacatgtgggatatggggagaaagatcctgttcgtggtaacgat
tcctttgttagtttcaacgaaattttagaaattgctcgtgaaagagatgtggatatgatt
ttgttaggcggtgatatatttcatgacaacaaaccgtcaagaaaggctttgtatcaagca
cttcgctcactcagattaaactgtttaggagacaaaccatgtgaacttgagctattaagt
gacacatccttaaccactggggatacggctgtttgcaatattaattacttagatccgaac
atcaacgtggctataccagttttctcaattcatggtaatcacgatgacccttctggtgat
ggtcgttatagtgctttggatattcttcaagtaactggcttagtgaactactttggtcgt
gttccagagaatgataacattgtggtgagtccaatattgctgcaaaaaggtttcacaaaa
cttgcattatacggaatttcaaatgttcgagatgaaagactttatcactcttttcgtgaa
aataaggttaaatttttacgtcctgatctatatcgggatgaatggttcaacttattgacc
gtacatcaaaatcactctgcccatacaccaacgagctatttacctgaaagcttcatccaa
gatttctatgacttcgtgttatggggacacgaacacgagtgtctgatagatggcagctat
aatcctacacaaaaatttacagtggtacaaccaggatcaactattgcaacttctttaagt
cctggtgaaactgcacccaagcattgtggtatcttaaatattactgggaaagattttcat
ttagagaagattcgtttgcgaacggttcggccatttataatgaaggacattattctctca
gaggtttcttccatccccccaatggtggaaaataaaaaggaagtattaacgtatttaatc
tcaaaagttgaagaggcaattactgaagcaaatgcacaatggtacgaagctcaaggaacc
gttccagtggttgaaaacgaaaagccacctcttcctttaattcggttacgtgtcgattat
acaggtggataccaaacggaaaatccccagcggttttctaatagatttgttggcagggtt
gcaaatgcaacagatgttgtccaattttatcttaaaaaaaaatacactaggtctaaaaga
aacgacggcctatatacttccgcagtagaagatatcaaaattaactctcttcgagttgag
tcattggtaaacgaatacttaaaaacaaataggctagaatgtcttcctgaagatagtctt
ggtgaagcggtggttaactttgttgaaaaagacgacagagatgctattaaagaatgcgtc
gaaacacagcttaataaacaaatcaacttattggttaaaaaacgagttacggaggaaaat
cttgaacaagaaataagctctatcatcaatgatcttccaaaaatttcaactacaaaacgg
aaagattacgaagagttaccagaggaggtatcagaaacttctataaatattgctgagcac
acacctgtacttaaacataccagctcactgttggatcatcattcaccgttagcgacttct
tcgagtgagcatgaaatggaagcaacaccttctccagcacttttgaaaaaaactaataag
cgacgagaattaccgtcttctttaacgaagaaaaataccagaacaccacaaagaagcaaa
gaagtgaaaaaagtaccagctcgtaaattgtcacaatcaacgaaaaagagtgacaaaaat
acacaatctacgcttctattttacgacccatccagcaccacagaagcgcagtacttggat
aacgaggatgacgaaattttagatgattga
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