Schizosaccharomyces pombe (fission yeast): 2542805
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Entry
2542805 CDS
T00076
Symbol
ain1, SPOM_SPAC15A10.08
Name
(RefSeq) alpha-actinin
Organism
spo
Schizosaccharomyces pombe (fission yeast)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
CAMSAP_CH
EFhand_Ca_insen
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
2542805
NCBI-ProteinID:
NP_594295
PomBase:
SPAC15A10.08
SPAC15A10.08.1
UniProt:
O13728
Structure
PDB
PDBj
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All DBs
Position
I:join(3692835..3692884,3692936..3693162,3693303..3694891)
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AA seq
621 aa
AA seq
DB search
MQANQWQSVQNRTFTKWFNTKLSSRDLPSVFDLRKDLSDGILLIQLLEIIGDENLGRYNR
NPRMRVHRLENVNKALEYIKSKGMPLTNIGPADIVDGNLKLILGLIWTLILRFTIADINE
EGLTAKEGLLLWCQRKTANYHPEVDVQDFTRSWTNGLAFCALIHQHRPDLLDYNKLDKKN
HRANMQLAFDIAQKSIGIPRLIEVEDVCDVDRPDERSIMTYVAEYFHAFSTLDKVETAAR
RVERFTEVLMSTHDMKIDYESRMKRLLGSIARMQEYWHTVQFENNYTDVKSHSNNFAKFK
ATEKREWVKEKIDLESLLGTIQTNLKTYQLRKYEPPAGLKIVDLERQWKDFLSEEANQSK
LINTHMREIKESMRIAFADRANSFSKMLSTISNEITNLQGDWRDQLDHVEFLQEHLGPLE
VELASVKVLYDNCFQAGIEENDYTMFSYEDLEHEFGITANIIANKIKYLENELLEREKRT
LSKQELDGITKVFRHFEKKKSNMLNEVEFYAALASLGLVYDTEEGTALFHRAANSEEGVT
YERFTEIVMEELEDRDSARQVLYAFCDVADGKSYVTSDDLLRSQVRPNIVKFLECNMNKH
SEGLDYLTWIKQLLAEDKEIV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcaaatcaatggcaaagcgtacaaaatagaacatttacaaaatggttcaacaca
aaactttcatcgagagacttaccatctgtgtttgacttgagaaaggatttatcagatgga
attttgttaatacaacttttggaaattattggagatgaaaatttagggagatacaatcga
aacccgcgtatgcgtgttcataggttggagaatgtcaacaaagctttagaatatataaaa
agcaaaggaatgccgttgaccaacattggtcctgctgatattgtggatgggaacctgaag
ctaattctgggacttatttggacgctcattttacgttttactatagctgatatcaatgaa
gaaggtcttaccgcaaaggaaggtctattgctttggtgtcagagaaaaacagcaaactac
catccagaggttgatgtgcaagattttactcggagttggacaaacggcttggctttctgt
gcattaatccatcagcaccgtcctgatttactggattacaataagcttgacaagaagaac
catagagctaatatgcaattggcttttgacattgcgcaaaaatctattggaattcctcgt
ttgatagaggtcgaagatgtttgtgacgttgaccgacccgatgagcgtagtataatgact
tatgtcgccgaatacttccatgcgttttctaccttggataaagtggaaactgcggctaga
cgtgtagagaggtttactgaagttttgatgagcactcatgatatgaaaattgactacgag
tctcgaatgaaacgactgttgggaagcattgcaaggatgcaggagtactggcataccgtc
caatttgagaacaactataccgacgtgaaatctcattctaataattttgccaaattcaaa
gctactgagaaaagagagtgggtaaaggaaaaaatagacttggaatctcttttgggaact
atacaaaccaatttgaaaacatatcaacttcggaagtacgaaccgcctgcgggattaaag
atcgtcgatttggaaagacagtggaaagattttctttcagaagaagccaatcaatcgaaa
ttgattaatacccacatgagagaaataaaagaaagtatgagaattgcttttgctgatcgt
gccaacagtttctcaaaaatgttatctacgatatcaaatgagattaccaatttacagggt
gattggcgtgaccaactcgaccatgttgaatttttgcaagaacacctggggcctcttgaa
gttgaactggctagtgtgaaggtgttgtatgataactgttttcaagctggaattgaagaa
aatgattacaccatgttttcctacgaagacctggagcatgaatttggtattactgccaat
atcattgccaataagatcaagtaccttgagaatgaactcttagaaagggaaaagagaaca
ctctccaaacaagaactagacggaattactaaagtctttcgccattttgaaaagaaaaaa
tcaaatatgttaaatgaggtcgagttttatgccgcattggcctcattgggcttggtttat
gataccgaagaaggaactgctttgtttcacagggctgctaactcggaagagggtgttact
tatgagcgttttacagaaatcgtgatggaagaattagaggatcgtgatagtgctcgtcaa
gttttatatgcgttttgtgatgttgcagacggaaaatcttatgtcacgtccgatgatcta
ttgaggagtcaggttcgtcctaatatagtaaagtttttagaatgcaacatgaacaaacat
tcagaaggactggattatcttacatggattaaacaattactggccgaagacaaagaaata
gtttaa
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