Schizosaccharomyces pombe (fission yeast): 2543197
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Entry
2543197 CDS
T00076
Symbol
dbp10, SPOM_SPAC31A2.07C
Name
(RefSeq) ATP-dependent RNA helicase Dbp10
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2543197 (dbp10)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
2543197 (dbp10)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
Pre-60S particles
Helicases
2543197 (dbp10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
2543197
NCBI-ProteinID:
NP_592919
PomBase:
SPAC31A2.07c
SPAC31A2.07c.1
UniProt:
Q09719
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Position
I:complement(join(399548..401871,401972..402194))
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AA seq
848 aa
AA seq
DB search
MSGFQTSDEVDISNSLKAFPVDIATDNQKDKHENVGENVSDEDDGNYIASKLLESNRRTK
GKKGNGKASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKT
AAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLE
EQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHA
LPTSRQTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQSAFFSVKTAEREAAL
LCILQDIIKLPLKDNVRPREIGNVNNPKKRKRALELALKGSESGSPDSTLVFVPTKHHVE
YVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRGIDIPLLANVIN
YDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLDLQLFLNRPLVTSSKQVKTDS
DCDFTKQIVLGSLPQELVAELLEWVQRIVSRDVELQQLSNVAARGEKLYFRTRATCSAES
AKRAKELVDSKGWSSNNPLFGDVSVIEAEEKYAELLSKVSSYRPSETVFEIGQRGHLKTE
AAEIMRKRRNKVKPKGIKSEVASDKITDSSPGNMSEASESELEEVFKNPKELSKKKTTDF
KDKEYYMSHYAPKESIQETGYAINSGENFTTAARHAILDLTNDEGIEQSRKGGQRWDPKK
KKFVNIINDEDGSKGSPKIIRGESGVKLPATYRSGRFDEWKASKAFGANDSPIRENKRYK
HNKLQTPKPADKFRDNYHKQNKRNREAKERGIGIKVNSELKSAVEIRKARELKEKRLAKN
NRPSKKHR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtccggattccagacgtccgacgaggtcgatatatcaaattctttaaaagcttttcct
gttgatattgctactgataatcaaaaagataagcacgaaaatgttggtgaaaatgtgagc
gatgaagatgatggtaattatattgcctcgaagcttttggagtctaacaggaggacgaag
ggaaaaaaggggaatggaaaggcttctaatttccaatcgatgggattgaatcaaacttta
cttcgagcaatatttaagaagggttttaaagctcctacgccgattcagcgcaaaacgatt
ccccttttattggaaggtcgtgatgttgtaggtatggcacgtactggatcaggtaaaact
gcagcttttgttatacctatgattgagcatttgaagtccactctagcaaactctaatact
cgcgccttaattctctcgccaaatcgagaacttgctcttcagactgtgaaagtcgtcaaa
gacttttctaaaggtacggatcttcgatctgtcgctatcgtcggtggcgtcagtctagag
gagcaatttagtttgctatccggaaaacccgatattgtggtcgcaactcctggaagattt
ctacatttaaaggtggaaatgaaattggagttgagttcaatcgagtatgtcgttttcgat
gaggccgatagactttttgaaatgggttttgctgctcaattgacagagattttacatgct
ttgccgacttctcgtcaaactcttctcttctctgccacacttccacgtactcttgttgat
tttgcaaaggctggacttcaagacccggttcttgtacgccttgatgtagaatccaaggtt
tccgcggatctacaaagtgcctttttttctgttaaaaccgctgaacgcgaagctgctctc
ttatgtatactacaagatatcattaagcttcctctaaaagataacgtgcgcccaagagaa
ataggaaatgtcaataatccgaagaaaagaaaacgtgcattagaattagcgcttaaagga
agtgaatctggatcaccagattctactctagtatttgttcctacaaaacatcatgtcgag
tatgtttctgagttacttgttcaagcaggatattcggtttcaaaaatttacgggtctttg
gaccaagaagcgcgtctcaatgaaattaataattttcgacttggaaaaacaaatttacta
gtcgttacagacgtagcttctcgtggtattgacatcccattacttgctaatgttattaat
tatgatttccctcctcaaccaaaagtttttgttcaccgtgtaggacgtacagctcgagca
ggacgcactggctgggcgtattcattggttagagcagaagatgctggttatttattagac
ttacaactatttttaaaccgacctttagttacatcctcgaagcaggttaaaactgactcg
gattgtgattttacaaaacagattgttttgggatcattaccccaagaacttgttgctgag
ctactagaatgggtacaaagaatagtttcgagagacgttgagctacagcaactttccaac
gttgctgcaaggggtgagaaactatattttcgcacaagagctacttgtagtgctgagagt
gctaaaagagctaaggaattggttgatagcaagggctggagttccaacaatccattattt
ggagatgtatcggtaattgaggccgaggagaaatatgctgaattgctttcaaaagtttct
tcttatcggccatcagaaacagtatttgaaatcggtcagcgtggtcacttaaagacagaa
gctgcagaaatcatgcggaaaagaagaaacaaagtaaaaccaaaaggaataaaatctgaa
gttgcatctgataaaatcactgacagttctcctggtaatatgtcagaagcttcagagtca
gagcttgaagaggtatttaaaaatcctaaggagttatcaaaaaagaagacaactgatttt
aaagataaagagtattatatgtctcattacgctccaaaggaatctattcaagaaactggc
tatgctataaattctggtgaaaattttactaccgcagctcgtcatgctattctcgattta
acaaatgacgaaggaattgaacaatcaaggaaggggggacaacgttgggatccaaagaaa
aagaaatttgttaatataattaacgacgaagacgggtccaaagggtctcccaagataatt
cgtggcgaaagcggcgtgaaattgcctgcaacatatcgtagtggtcgttttgatgaatgg
aaagcatctaaagcattcggtgccaacgattctcctatacgggaaaataagcgatataaa
cataataagttacagactccaaaaccagctgataagttccgtgataactatcacaaacaa
aataaacgtaatagagaggctaaagaaagaggaataggtattaaggtgaacagtgagctt
aaatcagctgttgaaattagaaaggcgcgtgagctcaaagagaaacgacttgccaaaaac
aatcggccgtcaaaaaagcatcgataa
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