Schizosaccharomyces pombe (fission yeast): 2543238
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Entry
2543238 CDS
T00076
Symbol
rrp12, SPOM_SPAPB8E5.07C
Name
(RefSeq) ribosome biogenesis protein Rrp12
KO
K14794
ribosomal RNA-processing protein 12
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2543238 (rrp12)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
90S particles
Other 90S particles
2543238 (rrp12)
Pre-60S particles
Other pre-60S particles
2543238 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
2543238
NCBI-ProteinID:
NP_594781
PomBase:
SPAPB8E5.07c
SPAPB8E5.07c.1
UniProt:
Q9C0X8
LinkDB
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Position
I:complement(4919839..4923330)
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AA seq
1163 aa
AA seq
DB search
MAEVNEPLQIELRKIRNSSTAGVINEFDVIVSAVEGTLKEQKTEATPTAYLVALLTLVKE
FTDLKKNFKGHTFQLLELVIKYVPSNVLQAKFPQILSVLAPVVNNAETNKTVLLPYLNVL
EKLLLLQDYSSWTHGNSCKTSIYILLFFALSNTEKTRVRSLQILANILKNPPAGPVTEHP
AIKYTAFEPLRLLESLATAKKPKTPAEVQKLNNSLVLIRVLCSSTHWPMTLVERLCRSCV
LIVGQRSTNSILLVYQILDGLSKKSVDYTDAVSLRMTLICLQKLEPSEHDPILMVGWLKA
MNTAIRAFNILDKETAKYECLHRFKAFFTLLESESMEIRLQTATTICSVIGCLDTTPNSF
AVVEEICSFICDALRDIRFRLAYPECFQIISSLCDKLGPHSDPYLIPALEVIDYLRGSEG
FDGKALVDEAIGSFVRAIGPEAMLRVLPLNLELNDKDAVGRAWLLPVLRDNIRFANLAHF
TNYFVPLSGQLYQKVIEMNDLDSIPSKLLQTLVDQIWSLLPGYCYLPLDLQSSFTLEFAS
ILVNVLYEQVSLRSVICNSLTALVETNSKVADKLPLDDVISVPVSASDASSNLAFLTNMS
SNFLSVLLNVFSSTPSQYRYPILKCIQTWIFISSNDTIHSVYKKVTDLLPDSLNDLAGSF
NIAADGISSPMAYSLIDLLIVISPYLNQDYAVTLFEYVHEFLRHVNPAIQKKGYKLLGTL
LRVDYGKAYATQHVKEIFEELSSVADRVVSSTRKDRLASLNALYELQSSELVIAIPQLLP
EAIISLKEVNEKARHTAFQLLFNIAKSAVNSVEFGNSKPERVEKFVSVISAGLAGSSTHM
ISATIIAISSIVMEYKVFISEPFLVQLISTLNLFITSSKREIAKAAIDFIKISVSSFPVE
CIKPLLPELIPNLLAWSHEGKANLRVKVRHLFEKMGRKYGIAEIEPFFPAEDKKLITNIR
KTQERNIRKRAMKRDPAKPSSAQPRKTFASAYEAAVYDTDDEAEEEFENDEMNNGNGGDL
RMDEAFVQEDNDEEPLDLLDIEAVSKISSTDPRKKLAARKQKLNSAFKSNEEGRLLINDS
DEDELIEDSLANAQQHAEVNRTYLEAVAGKESFRRGLNNRVKFSNKRVRDDYDEEMEEVE
VPEVTRKPAKQKFDRKQRGQKGY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtgaatgaaccattgcaaattgaacttcgaaagattcgaaacagctccact
gcaggtgtcataaacgaattcgatgtaatcgttagtgcagtggaggggacgttgaaggag
caaaaaactgaggcgacaccaactgcttatttggtggcccttctaactttagttaaggaa
ttcacggacttaaagaaaaattttaagggacacacgtttcaactactggaattggttatt
aagtatgtgccctctaatgttctgcaagcaaaatttccccagatcttgtctgtccttgct
ccagttgtaaataatgcagaaaccaataaaaccgtccttctcccctatcttaatgttttg
gagaagcttttacttcttcaggattatagctcttggactcatggcaattcttgcaaaact
tctatctatattttattattctttgcattgtccaatactgagaagacgagagtacgttct
ttgcaaattctggccaacatattaaaaaatcctccggcaggtcctgtaacggagcatcct
gctataaaatatactgcattcgagccacttcgtcttttggagtcgctcgctactgccaaa
aagcccaaaactcctgcagaagtccaaaagcttaataatagtttggttcttattcgtgtg
ctttgttcttctacacattggccaatgactctcgtcgaaaggctatgtaggtcctgcgta
ttaattgttggacaacgaagcacaaattccattcttcttgtttatcaaattttggatggg
ttgtcaaaaaaatcagtggattatacagatgctgttagtctacgaatgactctgatttgt
ttgcaaaaattggagccatcagaacacgatccgattctgatggtaggctggttgaaggcc
atgaatacggccattcgcgcctttaatattttagacaaggagactgcaaaatatgaatgc
cttcatagatttaaagctttctttactttgttggaatctgaatcgatggagattcgcttg
caaacggccaccacaatttgttctgtaattggttgtttggacactactccaaattcattt
gccgttgtcgaagaaatctgttcctttatttgtgatgcattaagggatattcgttttcgt
cttgcttacccagaatgctttcagattatctcttctttgtgtgacaaattaggtcctcat
tcagatccctatttaattccagccttggaggtcattgattaccttaggggatcggaaggg
tttgatggaaaggcactggttgatgaagccattggctcctttgttcgtgcaattggtccc
gaagccatgttacgtgttctccctttgaatttggaattgaacgataaggatgccgttggg
cgcgcgtggcttcttcccgttttgcgtgacaatattcggtttgctaatttagcccatttc
actaattattttgtccctcttagtggccaactttatcaaaaggtaattgaaatgaatgat
ctagatagcattccctcaaaattattgcaaactctagttgaccagatctggtctctccta
cctggttattgctacttgcctttggacttgcaatcatcattcactctggaatttgctagt
attctagtcaatgtcttgtacgaacaagttagtctaagatcagttatctgtaatagttta
actgctttggttgaaacgaattctaaggtggccgataagctacctttagatgatgtgata
tcagttcctgtgagtgcatctgacgcatctagtaatttagcttttttgactaatatgtct
tcaaatttcttatcagttttacttaatgttttttcctccactccttcacaatatcgctat
ccgatattgaagtgtatccaaacttggatatttatatcttctaatgatactattcattct
gtgtataaaaaagttacagatctccttcctgatagcctaaatgatttggctggatcgttt
aatatagctgcagatggcatctcctctcctatggcctattctctaattgatttattgata
gttatatcgccctatttgaaccaagactatgctgtgaccttgtttgaatatgtacatgag
tttctgagacatgtaaacccggctattcaaaagaagggttacaaattattaggaacttta
ttgcgtgttgattatggaaaggcatatgctacgcaacacgtcaaggaaatatttgaggag
ttatcctctgttgccgatcgcgttgtttcgtcaactcgtaaagataggctggctagtttg
aatgccctatacgagcttcagtccagcgaattagttattgcgattccacagttacttccc
gaagcaataatatcgcttaaagaagttaacgaaaaggctcgtcataccgcctttcaactt
ttattcaacattgctaagtcagccgtaaattcggttgaatttggcaactcaaagcccgag
agagttgagaaatttgtttccgttattagtgcaggtttagctggatcctctacccatatg
atcagtgctactataattgcgatatcttctattgtaatggaatacaaagtttttatttct
gaaccgtttttggttcagttaataagcacgttgaacttgtttatcacatcttctaaacga
gaaattgcaaaggcggctattgattttataaagattagtgtttcatcgtttcctgtagaa
tgcataaagccacttcttccggaactaattccgaatttgctcgcttggtctcatgaagga
aaagccaacttacgggtaaaagttcgtcatttatttgagaaaatgggtcgcaaatacggt
attgctgaaatagaacccttcttcccagctgaagataaaaagcttattacgaatatccgt
aaaacacaagagcgtaatattcgtaagcgtgctatgaagcgtgatcctgctaaaccttcc
agcgcacaaccgcgtaaaacattcgcatcagcttacgaagcagctgtgtacgatactgat
gatgaagctgaagaagagtttgaaaatgatgagatgaataacggaaatggcggagacttg
agaatggatgaggcgttcgttcaagaggacaatgatgaagagccgttggatttgttagac
atcgaggcagtttcaaaaatttcatccactgatcctcgtaaaaaattggctgctagaaag
cagaaacttaattccgcctttaagtcaaacgaagagggtcgtttgctcatcaatgattct
gacgaggatgaactcattgaggatagtttggcgaatgctcagcaacatgcagaggtgaac
cgaacatacttggaagctgtagctggaaaagagagtttcagacgcggactcaacaacagg
gttaagtttagcaataagcgtgttcgtgatgattacgacgaagaaatggaagaagttgaa
gtgccggaggttacaaggaaaccggccaaacaaaagtttgataggaagcaacgtggacaa
aaaggatattaa
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