Schizosaccharomyces pombe (fission yeast): 2543298
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Entry
2543298 CDS
T00076
Symbol
cpc2, SPOM_SPAC6B12.15
Name
(RefSeq) 40S ribosomal protein RACK1
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2543298 (cpc2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
2543298 (cpc2)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
2543298 (cpc2)
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
2543298 (cpc2)
Exosomal proteins of colorectal cancer cells
2543298 (cpc2)
Exosomal proteins of bladder cancer cells
2543298 (cpc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_WDR75_2nd
WD40_2
Motif
Other DBs
NCBI-GeneID:
2543298
NCBI-ProteinID:
NP_593770
UniProt:
Q10281
Structure
PDB
PDBj
LinkDB
All DBs
Position
I:join(2439532..2439657,2439855..2440253,2440507..2440926)
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AA seq
314 aa
AA seq
DB search
MPEQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLT
GHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQV
VSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLE
TFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALV
FSPNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFS
GWTDNLIRVWQVTK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacaacttgtgctccgtgcaactctcgaaggtcactctggatgggttacatct
ctttctactgcccccgagaaccctgatattcttctttccggttctcgtgacaagtccatc
attttgtggaacttggtccgtgatgacgtgaattatggagtcgcacagagacgtttgacc
ggccacagccacttcgtttctgactgtgccctttccttcgatagtcactatgccttgtct
gcctcttgggataagaccatccgtttgtgggatcttgagaagggtgagtgcactcaccaa
ttcgttggccacaccagcgatgtcttatctgtctccatttctcctgacaaccgccaggtt
gtttctggttcccgtgacaagaccattaagatttggaacattattggtaactgcaagtac
actatcaccgatggtggtcactctgactgggtttcttgtgtgcgcttctctcctaacccc
gataaccttaccttcgtctctgctggttgggacaaggccgttaaggtttgggatttggaa
accttctcccttcgcacttctcactatggccatactggttacgtatctgcagtcaccatc
tcccctgatggatctctttgtgcttccggtggaagagacggtaccttgatgctttgggat
cttaacgagtctacccacctctactctttggaagccaaggctaacattaatgcccttgtt
ttctcccctaaccgttactggctttgtgccgccactggttcttccattcgtatcttcgat
ttggagactcaagagaaggttgatgaacttactgttgactttgttggtgttggcaagaag
agctctgagcctgagtgtatttctcttacctggtctcctgatggccaaactttgttctct
ggctggactgataatctcattcgtgtctggcaagttaccaagtaa
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integrated database retrieval system
