Schizosaccharomyces pombe (fission yeast): 2543359
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Entry
2543359 CDS
T00076
Symbol
vps11, SPOM_SPAC823.12
Name
(RefSeq) HOPs complex subunit Pep5/Vps11
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04138
Autophagy - yeast
spo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
2543359 (vps11)
04148 Efferocytosis
2543359 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2543359 (vps11)
Membrane trafficking [BR:
spo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
2543359 (vps11)
Hops complex
2543359 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
Clathrin
zf-C3H2C3
WD40_WDHD1_1st
zf_RING_Vps8
zf_RING_Vps8_fungal
ATP-synt_10
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
2543359
NCBI-ProteinID:
NP_593839
PomBase:
SPAC823.12
SPAC823.12.1
UniProt:
Q9P6N4
LinkDB
All DBs
Position
I:2601242..2603962
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AA seq
906 aa
AA seq
DB search
MSTFIKNWKRITLFQVKAIEENIDRLTSSFSSNGELVVFATAFGDVSIYNSSFKSLQSIK
VEDESSIQQILWLDNKTFLLFSNVEGGTGTNSTVIIYAFSQADENEPPQFVLVTTHKFSI
NESPYPIIAVSQSPIDKTIACGFGGGLVSCYHGNPLRERGIKNSYSHNLGEPITGLTYLD
DQSSVLFIATTNKTYSLSGKSLSCLDNTGVSLNCSSSCKTTPLQSREKNSSSFVCTRSSG
LTFYDSKREKICFTFPGEKHYMTVMGSILALCYTPTLGTDSSTNEGLKKSFSSSSSIRKA
DASRNPAFPPRLLLVDLSRNLIVWEGHLKDVAVSILPLKHGFLVVTADDNVFELKRITLQ
EEISLLCQKMMYNLAISLAKKENMDIEFRESLMRDYASFLFRRGDFSASMDWYIRSIKSI
DIPSVCLEFLKAQEIKQLIRLLEELIKTGLATSDHRLLLLSCYVEIHDSPSIRKLIDIGE
IDFDQAFKICYDSNLLDEAKHLAIRFNNNERVLDVLVESEQYSEALRFFESLPPSNLLPL
LLKYGRVLLDKLPEKTTNIFIQFYSNSHRGDLSTSESKGELKTAKSLRQTYLSLLPYAQV
ANFSLPPSLYEISPSQEENQRAALFSEDVSYTAPSPQTCFHIFLNHNSELISFLEGILPN
ASPNYKTLINTCLFEAYIRESFASSNVEKQEFWQEKSNSLLKKVEKNVDLNAVFLISQIL
GFDDGVRFVQGKSGQTLDIFRSFCQQNDIERALKMVRVHGPDQQELYIMMLNCFASLENV
DSWYQDINEIVNIIVSQRLISPTQLLDILGKSVNIKLEHISDSMQSVLDNYRESISKQNE
AIEMGKRDIEEITSQLSILRTRAFVVQESKCSTCGIDLELPMVHFRCGHSYHQRCVEDEC
IRCRWL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgttcattaaaaattggaagagaataactttgtttcaggttaaagcgatagaa
gaaaatatcgatagactgactagtagcttctcctcaaatggtgaactagtagtatttgct
acagcttttggtgacgtctcgatctataattcatcttttaagtcactacaatcgattaaa
gttgaagacgaatcttcaattcaacaaattctttggcttgataacaaaacatttttatta
ttttctaatgttgaagggggtactggcaccaatagtactgtaattatttacgcgttttct
caggcagatgaaaatgaaccaccacagtttgttttggttactacgcacaagttttctata
aacgagtctccgtatcctataattgcagtttctcagtctcccattgataagactattgct
tgtggatttggtggaggccttgtatcgtgctatcatggaaatccgttgcgtgaaagagga
attaaaaattcctattcacacaatcttggtgagccgataacgggattgacatatttagat
gatcagagctctgttctcttcattgccaccacaaacaaaacttactctttgagcggtaaa
tctttaagctgtttagacaacactggtgtttccttaaactgctcttcttcttgtaaaaca
acacctttacaatcacgcgaaaaaaactcttcctcattcgtttgtacaaggtcctccggc
cttacattttatgactctaaacgtgaaaaaatttgttttacgtttcctggagaaaagcac
tacatgacagtaatgggttccattcttgctttatgttacactccaacattaggaactgat
tcatcgaccaacgaagggctaaaaaagtcattttcatcgtcaagttcaataagaaaagcg
gacgcatcgcgtaatcctgcgtttcctccacgtctcctccttgttgatctttctagaaac
ctcattgtttgggaaggtcatctgaaggatgttgctgtttcaatcttgccattaaaacat
gggtttttggtagtgaccgctgatgataacgtttttgagttaaaacgaatcactttgcaa
gaagagatttcgctgctttgccaaaaaatgatgtacaacttggcaatatctttagccaaa
aaagaaaatatggacattgaatttagagaatcattaatgcgagattatgcctcctttctt
ttccgtagaggtgacttttcggcttctatggattggtatatacgttctattaagtcgatc
gacattccttccgtatgtcttgaatttttgaaagctcaagaaattaagcaacttatccgt
cttcttgaagaacttataaagacgggtttagcgacttctgatcaccgattattgctatta
tcttgttatgttgagatacatgactccccttcaattaggaaacttattgacataggtgaa
attgattttgatcaagcatttaaaatttgttacgattctaatttgttagatgaagcgaag
catttagcaatacgtttcaataataacgagcgggttttagatgttctggttgaaagtgaa
cagtattctgaagcattaaggtttttcgaaagtttacccccttcaaatttgcttccattg
cttttaaaatatggccgagttttattagataaactgcctgaaaaaacgaccaatattttt
atacaattttactccaattctcacagaggggatttatctacctctgaatctaaaggtgaa
cttaagactgcgaaatctttgagacaaacttatctttcactacttccctatgcacaggtt
gctaactttagtttacctcctagtttatacgaaatttctccttctcaagaggaaaatcaa
cgtgcagcattgttttcagaggatgtttcttatactgcaccaagtccacaaacctgcttt
catatttttttaaatcataactcagaattgatttcatttctggaaggaatattaccaaat
gcatcaccaaattacaagactctcattaatacatgtcttttcgaagcgtatataagagaa
tcatttgcgtcctcaaacgttgaaaagcaagaattttggcaagaaaagtctaattccctt
ctaaaaaaagtagaaaaaaacgtagaccttaatgcagtctttttaatatctcaaattcta
ggatttgatgacggggttcgttttgttcaaggaaaatcgggtcaaacgcttgatatattt
cgctctttctgtcagcaaaacgatattgaacgggcattaaaaatggttcgtgttcatggt
ccagatcagcaagagttgtacatcatgatgttgaactgttttgcgtctttagaaaacgtt
gatagttggtatcaggatatcaacgaaatagttaacataattgtttctcaacgtcttatt
tcgccaacacaattgttagacattcttggaaaatcagtcaatatcaagctcgagcacatt
agtgactcaatgcaatctgttcttgacaattatcgtgaatcaatctcgaaacaaaatgag
gctattgaaatgggtaagcgggatattgaagaaattactagtcaactttcaattcttcgt
acaagagcatttgtcgtgcaagagtctaaatgctctacctgtggaatcgatttagagtta
cctatggtacattttcgctgtggacattcgtatcatcagcggtgtgttgaagatgaatgt
attcgttgtcgatggttataa
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