KEGG   Schizosaccharomyces pombe (fission yeast): 2543411
Entry
2543411           CDS       T00076                                 
Symbol
ypt71, SPOM_SPAPB1A10.10C
Name
(RefSeq) GTPase Ypt71
  KO
K07897  Ras-related protein Rab-7A
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo04138  Autophagy - yeast
spo04142  Lysosome biogenesis
spo04144  Endocytosis
spo04145  Phagosome
spo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:spo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    2543411 (ypt71)
   04145 Phagosome
    2543411 (ypt71)
   04142 Lysosome biogenesis
    2543411 (ypt71)
   04138 Autophagy - yeast
    2543411 (ypt71)
   04148 Efferocytosis
    2543411 (ypt71)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spo04131]
    2543411 (ypt71)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spo04147]
    2543411 (ypt71)
   04031 GTP-binding proteins [BR:spo04031]
    2543411 (ypt71)
Membrane trafficking [BR:spo04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    2543411 (ypt71)
Exosome [BR:spo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   2543411 (ypt71)
  Exosomal proteins of other body fluids (saliva and urine)
   2543411 (ypt71)
  Exosomal proteins of colorectal cancer cells
   2543411 (ypt71)
  Exosomal proteins of bladder cancer cells
   2543411 (ypt71)
GTP-binding proteins [BR:spo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    2543411 (ypt71)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 nSTAND3 RsgA_GTPase Septin AAA_22 SRPRB ATPase_2 AAA_16 ABC_tran AAA_7 PduV-EutP NACHT AAA_24 ATP-synt_ab cobW AAA_14 NB-ARC
Other DBs
NCBI-GeneID: 2543411
NCBI-ProteinID: NP_593524
PomBase: SPAPB1A10.10c SPAPB1A10.10c.1
UniProt: Q9HDY0
LinkDB
Position
I:complement(join(1880879..1881325,1881380..1881478,1881830..1881910))
AA seq 208 aa
MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ
LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFI
IVGNQIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALENE
SSRDDFVNDFSEPLLLSKPLNNTSSCNC
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtcggctcagaaaagggtgtttttaaaggttgttatattaggagatagtggcgttgga
aaaacatgtttaatgaatcagttcgtcaatcaaaagtttagtcgcgaatataaagctacc
atcggtgctgattttttaaccaaggacgttgtggttgacgacaaattggtcacattacag
ctttgggatactgctggtcaagaacgatttcaaagcctgggaatggctttttacagaggg
gccgattgttgtgtaattgtttataatgtgaataactcgaagtcttttgactcagtagaa
aactggaggcaagaatttttatatcaaacttcacaagatgaatgtgcattccctttcatt
atcgttggaaatcaaatcgacaaagacgcgtctaaacgagccgtatctcttcatcgagct
cttgactattgcaaatccaaacatggatcaaatatgattcattttgaagctagtgcaaaa
gaaaatacaaacgttactgaccttttcgaaacagtcagtcgtttagctttagaaaatgaa
agctcgagagatgactttgttaatgacttctctgaacctttgcttctttcaaagcctttg
aataatacatcttcttgtaattgctag

DBGET integrated database retrieval system