Schizosaccharomyces pombe (fission yeast): 2543459
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Entry
2543459 CDS
T00076
Symbol
sdo1, SPOM_SPAC4F8.03
Name
(RefSeq) SBDS family ribosome maturation protein Sdo1
KO
K14574
ribosome maturation protein SDO1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
2543459 (sdo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2543459 (sdo1)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
2543459 (sdo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
PDDEXK_4
Motif
Other DBs
NCBI-GeneID:
2543459
NCBI-ProteinID:
NP_593869
PomBase:
SPAC4F8.03
SPAC4F8.03.1
UniProt:
O14179
LinkDB
All DBs
Position
I:complement(join(2672171..2672783,2672978..2673105))
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AA seq
246 aa
AA seq
DB search
MVISQPVGQIRLTNVSVVKYKKGGKRFEVACYKNKVTEWRNKIETDLDEVLQIHNVFNNV
SKGHVASRQDLKKAFGTDDIDKIILEILQKGDFQVGEKERHHQMSSTYRDIVSHVTAMCM
DPNSKRPYPASIIEKALSDCGFSVSTSKTAKSQALEAIKKLQEKNEIPIVRARMRIRIVV
DVKQGKALRERLRSLADEIEEENIDDEYECIALVIPGNYKLIDELVRNETKNRGMVQVLD
MSEART
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggttattagtcaacctgttggacaaattcgtctaaccaatgtgtccgttgtaaaatat
aagaaaggagggaaaagatttgaagttgcttgttataaaaataaagttacagaatggaga
aacaaaattgaaacagatctggatgaagttttacaaatccacaatgtgtttaacaatgtt
tctaaaggacatgtagctagccgacaggatttgaaaaaggcttttggtacagatgatata
gataaaattattttagaaattttgcaaaaaggagattttcaagtaggtgaaaaggaaaga
catcatcaaatgtcttcaacttatcgcgatattgtctcccatgttactgcgatgtgcatg
gatcctaattctaaacgaccttatccagcatctataattgaaaaagcattatctgattgt
ggcttttctgtctctaccagtaaaactgcaaagtcccaagctctggaagctattaagaaa
ttgcaagaaaaaaacgaaattcctatcgtccgtgcgcgtatgcgcatcagaatagtggtg
gatgtcaaacagggaaaagctttacgagagcgtttacgctctttagctgatgaaattgaa
gaagaaaacattgatgatgaatatgagtgcatagctctcgtgattccagggaattataag
ttgatagatgaacttgtccgaaatgagaccaaaaaccgaggtatggttcaagtactcgac
atgagcgaggctaggacttaa
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