Schizosaccharomyces pombe (fission yeast): 2543571
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Entry
2543571 CDS
T00076
Symbol
rrp3, SPOM_SPAC823.08C
Name
(RefSeq) ATP-dependent RNA helicase Rrp3
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2543571 (rrp3)
03029 Mitochondrial biogenesis [BR:
spo03029
]
2543571 (rrp3)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
2543571 (rrp3)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
90S particles
Helicases
2543571 (rrp3)
Mitochondrial biogenesis [BR:
spo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
2543571 (rrp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
2543571
NCBI-ProteinID:
NP_593835
PomBase:
SPAC823.08c
SPAC823.08c.1
UniProt:
Q9P6N8
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Position
I:complement(2592647..2594044)
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AA seq
465 aa
AA seq
DB search
MAPSEKKLTEDKKNSSLNKKIETSNSSSEKSSENNNGDSQNNEAPKTFKELGVIDELCEA
CEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVL
APTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLE
NTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRA
SLHQPVRVAVSSKFSTVDTLIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFARTVNDTQR
LAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINY
DIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRIEATIGKKMQEYEIDKEGVFL
LSERVGEAQREAIIQMKEIHDRRKSKGKLHTKRKRDDLDREEQIY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcaccttctgagaaaaaacttactgaggataaaaaaaattcctcattgaataaaaag
attgaaacatctaattcaagctctgaaaaatcttcggaaaataataatggtgactcacaa
aacaacgaagcccctaaaacttttaaggaattaggagtaattgacgaattatgcgaagct
tgtgaaaaactgggatttaaaactccaactccgattcaacaagaagccattccagttgta
ttgaataaacgagatgttataggtctagctcaaactggtagtggtaaaactgcagcattt
gcgctgcctgtcattcaagaattgtggaacaatccgagcccattttttgcagtcgtgctt
gctccaactcgagaacttgcctatcaaatatctgaacaattcgaggctataggaggtagt
atcggcgttcgcagtgttgtaattgttggtggtatggatatggtaactcaagcagtcgct
ttatcaaaaaagcctcatgtcctagtttgtacacccggacgtctgatggatcatttggag
aacacgaaaggttttagtttaaagaatttgaaatatttaatcatggatgaagccgatcgt
cttcttgatatggattttggtccaattattgataaaattcttaaaattattcctcatgaa
agacgtactttgttattttctgctactatgactagcaaggttgaaaagcttcagcgtgca
tcccttcaccaacccgtgcgtgttgctgtatcttccaagtttagtaccgtcgatacccta
atacaacggtatttgttttttccatttaaacacaaggacacgtatctcgtttacttggta
aatgaacttgccggcaattcaattatcatattcgctcgtacagtaaacgatactcaacgg
ttggccatattattacgtaccttaggattttctgctattcctttacatggacagttgtct
caaagtaatcgtcttggggctttaaataaatttaagtcaggtgcgagatctactcttgtt
gcaactgatgtcgctgccagaggtctagatatacctcttgttgatgtagtaattaattac
gacattcctaccgactcaaaggcatatattcatagagttggtcgtaccgctcgagcaggt
cgggcaggtaaatctattgcattggttactcagtatgatttagaaccttttcttcgaatt
gaagctacaattggcaaaaaaatgcaggaatatgaaattgacaaggagggtgtatttctt
ttatctgaacgtgttggagaagctcaacgtgaagctattattcaaatgaaggagattcac
gataggagaaaatcaaagggaaaattgcacacgaagcgcaaacgtgatgatcttgatcgt
gaagaacaaatctattaa
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