Schizosaccharomyces pombe (fission yeast): 2543577
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Entry
2543577 CDS
T00076
Symbol
srs2, SPOM_SPAC4H3.05
Name
(RefSeq) UvrD subfamily ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03420
Nucleotide excision repair
spo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
2543577 (srs2)
03430 Mismatch repair
2543577 (srs2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spo03400
]
2543577 (srs2)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
2543577 (srs2)
DNA repair and recombination proteins [BR:
spo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
2543577 (srs2)
MMR (mismatch excision repair)
Other MMR factors
2543577 (srs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
Motif
Other DBs
NCBI-GeneID:
2543577
NCBI-ProteinID:
NP_594341
PomBase:
SPAC4H3.05
SPAC4H3.05.1
UniProt:
Q10213
LinkDB
All DBs
Position
I:join(3832775..3833136,3833202..3833466,3833512..3833942,3833988..3835593)
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AA seq
887 aa
AA seq
DB search
METKSSYLKFLNEEQRISVQSPHKYTQILAGPGSGKTRVLTARVAYLLQKNHIAAEDLII
ATFTNKAANEIKLRIEAILGNSEASKLISGTFHSIAYKYLVKYGKHIGLSSNWLIADRND
TQAIMKRLLDSLKKAKNPIASGIRGQELTPQNALNRITKLKSNGLLVKPGMDQLSLINGL
EEPPKELQSHQSVELYRLYQTSLWKNNLADFDDLLLNFILLLQKQPDCVRNIKHILIDEF
QDTSKIQYFLVKLLALQNSDITIVGDPDQSIYGFRSAEIRNLNQMSEDFEGTQVLHLERN
YRSAKPILELALSIISQDKSRPKKGLKSNHISSLKPHYRLFETNNKESYWIAREIKRIVG
SCPELIFYNDIAILVRSSSLTRSLEHALSELGVPYRMVGVNKFFDREEIRDLIAYLRVLA
NKDSTSLIRVINVPPRNIGKTKIDRIIFESERRGLTFWQTLNEVKNENILLSQRNDKSFL
KSLKSFLCSISKLENRYLSNGHSATLSDLLLGILSEIKYYEYLVRKNKETVEEKWENVME
LVQQSDNISCIFYELDYKISTIVLLQNFLTQIALVNEEQKEGESQKVTISTLHAAKGLEW
PVVFLPCLCENIIPHSRSDDLDEERRLLYVGATRAQALLYLSSFKSVTGMFADMQNSDNV
QDVSPFLKGEEMKRWVMESEIVFNEKIASEIGTILGRKSYGKITNLSGIGSNANHNGTKF
ENLGFQCCRVLAEAELKKRERVKSVNDYNKDETNFRKHNAKRSKTDIRSWFEKKQPIDSD
VEISEPSRSASIMVANKDLNDRSFETVNRIVSTRASTTNASFMSSVRQNLGRGPSTKDQV
INRTLREGHQDVVQHTDLNQSNTKVASARPAGSRKRLGVRLRVSRML
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaatcatcatacttgaagtttctgaatgaagaacaaaggattagtgttcag
agtcctcataagtatactcaaattttagccggtcctgggtctggaaaaacccgtgttctt
accgctcgagtagcctatttacttcaaaagaaccatattgcagccgaagatttaattata
gccacctttacgaacaaagccgcaaatgaaataaagctcagaattgaagctattttgggg
aatagtgaagcctctaagcttatttctgggacgtttcattctatagcgtacaagtatttg
gttaaatatggcaagcatatagggctatcctcaaattggttgattgctgacagaaatgat
actcaagctattatgaagcgacttttagactctctcaagaaagctaaaaatccgattgct
tctggtattagaggacaagaattgactcctcagaatgctctaaatcgcataactaaatta
aagtccaacggtcttcttgttaaacctggaatggatcagttgagtttgattaatggtctg
gaagaaccacctaaagagcttcaaagccatcaatctgttgaattgtatagactttatcaa
acttccttatggaagaacaatttagcggattttgatgatttgcttttaaactttatttta
ttacttcaaaagcaaccagattgtgtgaggaatataaaacatattttaatcgatgaattt
caagatactagcaaaatccaatattttcttgttaagcttttggcattgcaaaattcagat
atcacgattgttggcgatcccgatcaatcaatctatggatttcgaagtgctgaaattagg
aacttaaaccaaatgtctgaagactttgaaggtacccaagtgcttcatttggaaagaaat
taccgttcagctaaacctatacttgaattagcactgtctatcatttcacaggacaaaagc
aggcctaagaaggggctcaaaagtaatcacatctcttccttaaagcctcattaccgattg
tttgaaactaacaataaagaatcttactggatcgcaagagaaattaaacgtatagtaggt
tcttgtccagagcttatattttataacgatatcgcaatccttgtaaggtcctccagcctt
acaagaagtttagaacatgcactttccgaacttggtgtgccctaccgcatggttggagtt
aacaagttttttgatagagaagagattcgagacttaatagcttacttgagagtcctagct
aacaaagattcgacttctttaattcgtgtcatcaatgtccctcctagaaatattggcaaa
acaaaaatcgaccgtattattttcgaaagtgaaagaagaggattgaccttttggcaaact
ttaaatgaagtaaagaatgaaaatattttactttctcaaagaaatgacaagagttttcta
aagtctttaaagtcttttctttgttcaatctccaaacttgaaaatcgttacttgtctaat
gggcactcagcaactcttagtgatttacttttgggaatactttctgagattaaatattac
gaatacctggttcggaaaaataaagaaactgtcgaagaaaaatgggaaaatgtaatggag
cttgtacaacaaagcgataacatatcttgtatattctatgaattagattacaaaatatca
acaattgttctattgcagaattttttgactcaaatcgctcttgtgaatgaagaacagaaa
gagggcgaatctcagaaggttaccatttcaacccttcacgcagctaagggtttagagtgg
cctgttgtatttttaccttgtctttgtgaaaatattatccctcattctcgttcagacgac
ctcgacgaggaaagaaggctgctatatgtcggtgccacacgtgcacaggcgctactgtat
ctatcttcctttaaaagcgtcactggaatgtttgcagatatgcagaactcagacaatgta
caggacgtcagtccatttttaaaaggagaagaaatgaaaagatgggtgatggaaagtgaa
atagtttttaatgaaaagattgcttctgaaattggaaccatattgggtcggaaatcttat
gggaaaataactaatttaagcggtattggttcaaatgcaaatcataacggaactaaattc
gaaaacttgggcttccaatgctgtcgtgttctagctgaggcagaattgaaaaagagagaa
cgagtcaaaagtgtcaatgactataataaagatgaaacaaattttagaaaacataatgcc
aagagatcgaaaaccgatatacgaagttggtttgagaaaaaacaaccaatcgattcagat
gtagagatttctgagccgtcaaggtccgcaagcataatggttgcaaataaagatttaaat
gatcgaagttttgaaactgtcaatcgtattgtatcgacaagagcctcaacgacaaacgct
tctttcatgagcagcgtcagacaaaatcttggtagaggtccttctacgaaagatcaggta
ataaatagaacgttgagggaaggtcaccaagatgttgtgcaacatactgaccttaatcaa
tcaaatactaaggtcgcgagtgcccgtcctgctggttcgagaaaacgattgggtgtaagg
ctacgagtttcacgaatgttatag
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