KEGG   Schizosaccharomyces pombe (fission yeast): 2543583
Entry
2543583           CDS       T00076                                 
Symbol
cdc5, SPOM_SPAC644.12
Name
(RefSeq) splicing factor Cdc5
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    2543583 (cdc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spo03041]
    2543583 (cdc5)
   03400 DNA repair and recombination proteins [BR:spo03400]
    2543583 (cdc5)
Spliceosome [BR:spo03041]
 Complex B
  Other components
   Prp19 complex
    2543583 (cdc5)
 Complex C
   Prp19-CDC5 complex
    2543583 (cdc5)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    2543583 (cdc5)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 2543583
NCBI-ProteinID: NP_593880
PomBase: SPAC644.12 SPAC644.12.1
UniProt: P39964
Structure
LinkDB
Position
I:join(2694758..2694776,2694817..2694836,2694903..2694917,2694982..2695101,2695171..2695619,2695684..2697334)
AA seq 757 aa
MVVLKGGAWKNTEDEILKAAVSKYGKNQWARISSLLVRKTPKQCKARWYEWIDPSIKKTE
WSREEDEKLLHLAKLLPTQWRTIAPIVGRTATQCLERYQKLLDDLEAKENEQLGLISGEG
AEAAAPVNDPNSRLRFGEAEPNLETLPALPDAIDMDEDEKEMLSEARARLANTQGKKAKR
KDREKQLELTRRLSHLQKRRELKAAGINIKLFRRKKNEMDYNASIPFEKKPAIGFYDTSE
EDRQNFREKREADQKIIENGIRNNEMESEGRKFGHFEKPKPIDRVKKPNKDAQEEKMRRL
AEAEQMSKRRKLNLPSPTVSQDELDKVVKLGFAGDRARAMTDTTPDANYSTNLLGKYTQI
ERATPLRTPISGELEGREDSVTIEVRNQLMRNREQSSLLGQESIPLQPGGTGYTGVTPSH
AANGSALAAPQATPFRTPRDTFSINAAAERAGRLASERENKIRLKALRELLAKLPKPKND
YELMEPRFADETDVEATVGVLEEDATDRERRIQERIAEKERLAKARRSQVIQRDLIRPSV
TQPEKWKRSLENEDPTANVLLKEMIALISSDAINYPFGNSKVKGTANKVPDLSNEEIERC
RLLLKKEIGQLESDDYIQFEKEFLETYSALHNTSSLLPGLVIYEEDDEDVEAAEKFYTND
IQRDLAKKALECNKLENRVYDLVRSSYEQRNFLIKKISHAWKALQTERKNLTCYEFLYNQ
ERLALPNRLEAAEIELSKMQQIEAYAQQDYARVTGQN
NT seq 2274 nt   +upstreamnt  +downstreamnt
atggttgttttaaaaggaggtgcctggaaaaatacagaggatgaaatcttaaaggctgct
gtcagtaaatacggtaaaaaccaatgggcccgcataagttcattgctggttcgcaaaact
cctaaacaatgtaaagctcgttggtatgaatggatcgatccaagcattaaaaagactgaa
tggagtcgtgaagaggacgaaaaattattacacttagctaagttacttcctacacagtgg
cggacgattgctccaattgtaggtcggacggccactcaatgtttagaacgctatcaaaaa
cttcttgatgatttggaagcgaaagagaacgagcagttgggattgatcagtggagaaggt
gcagaagcagctgcgcctgttaacgatccaaattcccggcttcgttttggcgaagcagag
cccaatttagaaaccctacctgcactccctgatgccattgacatggatgaagacgaaaaa
gagatgttgagtgaagcacgtgcacgtttagcaaacacacaaggaaagaaagccaaacga
aaggatagagaaaagcagcttgaattaactagaagattgtcacatctccaaaagcgaaga
gaattgaaggcagctggaatcaatataaagctcttccgtcgaaagaagaatgaaatggat
tataacgcttctattccatttgaaaaaaagccagcgattggtttttatgatacctcagaa
gaggacaggcaaaattttcgggaaaagcgagaagcggaccagaagataattgaaaatgga
atacggaataatgaaatggaatccgaaggtcgaaaatttggtcattttgaaaagccaaaa
cctattgatagagtaaaaaagcccaacaaagatgcccaagaagaaaaaatgcgacgtctt
gccgaggctgagcagatgagcaagaggcggaagttgaatttacctagtcctactgtgtct
caagatgaactggataaagtagtgaaactaggctttgcaggcgatcgtgctcgcgctatg
actgatacgactccagatgctaattacagtactaatttgttaggaaagtatacacaaatt
gaacgagctactccattgagaacaccaattagtggtgaacttgagggaagagaggattca
gttacaattgaagttagaaatcaattgatgaggaaccgcgaacaatcttctctcttgggt
caggaaagtatacctttacaacctggtggtactggttacacaggagttactcccagtcat
gcagctaatggctcagctttggcagcacctcaagcaactccttttagaacaccacgtgac
acattttctattaatgcagctgcggagcgagcaggacgattagcaagtgaaagagaaaat
aaaattcgattgaaggctttgcgagaattgcttgcaaaactacctaaacctaaaaacgac
tatgaactaatggagcctcgatttgcggacgaaactgatgttgaagctactgttggagtg
cttgaagaagacgcaacagaccgagaacgtcgtatccaagaacgtattgcagaaaaagaa
aggttggcaaaagcgaggaggtcacaggttattcaaagagatttgattcgaccatctgta
acacaaccagaaaaatggaagcgttcacttgaaaatgaagatccgactgcaaatgtttta
ttgaaagaaatgattgctttgatttcatcggacgccattaattatccgtttggaaattca
aaagtgaaaggaacggctaacaaagtgcctgatttgtcaaatgaagaaattgagaggtgt
agattgttactaaagaaagagatagggcaactagaaagtgacgattatatccaattcgag
aaggaatttttggaaacgtacagtgcacttcacaacacctcaagtttgttgccaggcttg
gtaatctacgaggaagacgatgaagacgttgaagccgctgaaaagttttatacgaacgac
attcaacgagatttagctaagaaagcattggaatgtaacaagttggaaaatcgggtttat
gatttggttagatcttcatatgagcaacgtaattttttgataaagaaaatctcgcatgct
tggaaggctttgcaaacagaaaggaaaaatttaacgtgctacgaatttctatacaatcag
gagcgattagctctacctaataggcttgaagcagctgaaatagagctaagcaaaatgcaa
caaatcgaggcgtatgctcaacaagattatgctagggttactggacaaaattaa

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