Schizosaccharomyces pombe (fission yeast): 2543627
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Entry
2543627 CDS
T00076
Symbol
tfa1, SPOM_SPAC458.07
Name
(RefSeq) transcription factor TFIIE subunit Tfa1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
2543627 (tfa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2543627 (tfa1)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
2543627 (tfa1)
Prokaryotic type
Archaeal type
TFE
2543627 (tfa1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_Elf1
zf-C2H2_6
Zn_Ribbon_TF
zf-C2H2
zf-C2H2_4
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
2543627
NCBI-ProteinID:
NP_594701
UniProt:
Q9P3W1
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All DBs
Position
I:join(4744584..4744690,4744733..4744828,4744870..4745011,4745140..4746099)
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AA seq
434 aa
AA seq
DB search
MSNAPEIVQRLIKMIMRAFYETRHIIFMDAILRHSALTDEQTALLMGIPIKECRFIAGKL
REDRLLAIQSRTEMKEGQQRQYHTTYFYIDFCSTIDSIKWRMHQLVKTVEDRMRNDFDSK
GYVCPFCNKKFSSLDVLSLVTNEGTFACNVCGTELKDDEESAEMMSSQKRLGKLMGQVNG
IIDALKRVDEIVVPQNNFQSALEHAVPVSLDTQNLSQQNLSKSNSDVRLSTSSPSITVDF
SADKETDEKRERNCDKQVKAAQNILPEWHATSTISGSITRAGAKDAALHSFRTETVNEVQ
DTKTDITSEKSALDAYYATLRAKQKEESEFMDSENVDDEEDDDFLDVTTATSLQNKSTDY
GSVKRKTENLNSDSDIQNKRTKSIEENNSLPPIVSTNGITDGDTEMQESKKNVIINGFNE
DDEDDEDEADFEDV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgctccagaaatagtacagagacttataaaaatgattatgagggcgttttac
gaaactagacatataatatttatggatgcgattttgcgacattcagcacttacagatgag
caaacagcgctgttaatgggtatccctataaaagaatgtcggtttattgctggaaaattg
cgcgaggatcgtttattggcaattcaaagtaggacggaaatgaaggaaggccaacaaagg
caatatcatacaacctatttctatatcgatttctgttctacgattgacagcattaaatgg
cgtatgcaccaattagtgaaaacagtagaagatcgaatgcgaaatgatttcgattctaaa
ggctatgtttgtccattttgcaacaaaaagttttctagccttgacgttttgtctttggtg
accaacgagggaacttttgcttgtaacgtttgtggaaccgaactcaaagacgatgaggag
agtgcagaaatgatgtctagtcagaaaaggctaggaaaactgatgggacaagttaatggt
ataatcgatgcattgaaaagggtggatgaaattgtcgtaccacaaaacaatttccaatct
gctttagaacatgcggttcctgtttcgttagacacccaaaatttgtcgcaacaaaacttg
tcaaaaagtaattcagacgtccgtctttccacctcttcgccatctattacagttgatttc
tctgctgataaagagactgatgaaaagcgtgaaaggaattgcgacaagcaagtcaaagct
gctcaaaacattcttcccgaatggcatgcaacatcaacaatttctggctccattactcgt
gctggagctaaagatgccgcacttcatagttttagaactgaaactgttaatgaggttcaa
gacactaaaacagatattacttctgaaaagagcgccttagatgcttattacgcaacactt
cgtgcaaagcaaaaagaggaaagcgagtttatggacagtgaaaacgtagatgatgaggag
gatgatgacttcttagacgttacgacggctacctctcttcaaaacaaaagtactgattat
gggtcggtcaagcgtaaaaccgagaacctaaattcagatagtgatatccaaaataaaaga
acaaaatcgatagaagaaaacaattcattaccacctattgtttctacaaatggtattact
gatggtgatacggaaatgcaagaaagtaaaaagaatgttattattaatggatttaatgag
gacgatgaagacgatgaagatgaagctgattttgaagatgtttaa
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