Schizosaccharomyces pombe (fission yeast): 2543644
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Entry
2543644 CDS
T00076
Symbol
nxt1, SPOM_SPAPB1A10.03
Name
(RefSeq) mRNA export receptor Nxt1
KO
K14285
NTF2-related export protein 1/2
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03008
Ribosome biogenesis in eukaryotes
spo03013
Nucleocytoplasmic transport
spo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2543644 (nxt1)
03015 mRNA surveillance pathway
2543644 (nxt1)
03008 Ribosome biogenesis in eukaryotes
2543644 (nxt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2543644 (nxt1)
03009 Ribosome biogenesis [BR:
spo03009
]
2543644 (nxt1)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
2543644 (nxt1)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
2543644 (nxt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
Mtr2
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
2543644
NCBI-ProteinID:
NP_593517
PomBase:
SPAPB1A10.03
SPAPB1A10.03.1
UniProt:
P0CAN8
LinkDB
All DBs
Position
I:join(1863363..1863381,1863434..1863762)
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AA seq
115 aa
AA seq
DB search
MESSVKYAQEFVQRYYSSLDTNRNGIAEFYRENSLILWNGKPMQVTEFTSMIVNLPYSKT
KVEDFDSQQVMGNDMNIIIVVSGTIRFDGKKPHVFSYVSFYCIYLLVLRSSTNFL
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgagtgtaaaatatgcgcaggagttcgtccaacggtattactcatctcttgat
acgaacagaaatgggatcgcagaattttacagagaaaatagtttgatcttatggaatgga
aaacccatgcaagtaaccgaatttacctctatgatagttaatcttccatactccaaaact
aaagttgaggatttcgatagtcaacaggtcatgggtaatgatatgaatatcataattgtt
gtttcaggaacaatacgtttcgatggaaaaaaacctcatgtattttcgtatgtcagtttt
tattgtatttaccttcttgtactaagatcctctactaacttcctttaa
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