Schizosaccharomyces pombe (fission yeast): 2543675
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Entry
2543675 CDS
T00076
Symbol
spt20, SPOM_SPAC4D7.10C
Name
(RefSeq) SAGA complex subunit Spt20
KO
K11361
transcription factor SPT20
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2543675 (spt20)
03036 Chromosome and associated proteins [BR:
spo03036
]
2543675 (spt20)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
2543675 (spt20)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
2543675 (spt20)
SLIK complex
2543675 (spt20)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
CMD
Motif
Other DBs
NCBI-GeneID:
2543675
NCBI-ProteinID:
NP_001342846
PomBase:
SPAC4D7.10c
SPAC4D7.10c.1
LinkDB
All DBs
Position
I:complement(join(5370180..5370466,5370554..5371540,5371623..5371770))
Genome browser
AA seq
473 aa
AA seq
DB search
MERNNGLGDYTYRYHGKELSLDDFQNKQGIESSDDAFLSKIYENVSNFNVPRKLHDIEHK
FSKEEPSLILHIHKFHFRFEQQDGAFTYNGPVKSILQYIRMELIPPDCLEVFRNSDVKFY
DGCLTVRIIDHRQSPSADQTVQPQPGSTNQQQQNNTNPINNQPEDTKPNTNSPPVYHTVL
RPTPETLWQDLCLLSESFANSLSDEAVLTLESNILLASEAPLFLTPAKSKAEMIQFMNQL
ADSAPPCTRKKPQGSAQLADEEAERLEKENLLLLMDDQRKRDFQPTFQRLQFIENVRRKR
AILQQRQMQMQQQQKAQQQQSPKAQQPPAHLVQSAPVQRKTTPKIQRLPPSSIQIPPPKP
MQKFPANAASSESPPNATGNFLPSGPVPANEPMLKRESVDLIKIRQLAILFQQRASQLKA
RGATREQITEILNRQAIAAGTDLATVMTVARNLHFQQLQMRQQQQQQQMKAER
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaataatggtttgggcgactatacgtatcgctatcatgggaaggaattgagt
ttggacgattttcagaataaacaaggaattgaatcctcagatgatgcatttttatcaaaa
atttatgaaaacgtttcgaattttaatgttcccagaaaattgcatgatattgaacataaa
ttttcgaaagaagagccgagtttaattcttcatattcataaatttcattttcggtttgag
caacaagatggcgccttcacctataatgggccggtaaaatcaattttgcaatatataagg
atggagcttataccacctgattgtcttgaagtatttcggaattccgatgtaaaattctat
gatggttgcttaacggttcgtataatagatcatcggcaaagtccttctgctgatcagact
gtgcaacctcagcctggctctactaatcaacagcagcaaaataacaccaacccaattaat
aatcaacctgaagataccaaacccaatactaattcacctccagtgtatcatacagttctt
cgtcctactcccgaaacactttggcaagatttatgtttactttcagaaagctttgctaac
tcactttcggatgaagctgttttgactttggaatccaacattctactagcgtcagaagct
ccacttttcttaactcctgcgaagtctaaagcggaaatgattcaatttatgaaccagttg
gccgactctgcaccaccatgcaccagaaagaaacctcaaggatcagcccaacttgctgat
gaagaagcagaaagacttgaaaaagagaaccttttgttactaatggatgaccaaagaaaa
cgcgattttcaacctacctttcaaagactacaatttattgagaatgtgcggcgtaaacga
gctattctacaacaaaggcaaatgcaaatgcaacagcaacaaaaagcgcagcagcagcaa
tcaccgaaagctcagcaaccacccgcacatttggttcagtctgctccagttcaaagaaaa
actacacccaaaatccaacgtctaccacctagtagtattcaaattccccctccgaaacct
atgcagaaattcccagctaatgcggcatcttctgaatcgccccccaatgcgactggaaac
tttttaccttcgggtcctgtacctgcaaatgaacctatgttaaaacgagaatccgtggat
ttgataaaaatacgacaacttgcaattttgtttcaacagcgtgcctctcaattaaaagct
agaggtgctacacgggaacaaattactgaaattctgaatcgtcaagcaatagccgctggt
actgatttggcaacagtaatgacggttgcacgaaatcttcattttcaacaactccaaatg
agacagcagcaacaacagcagcaaatgaaggctgaaaggtaa
DBGET
integrated database retrieval system
