Schizosaccharomyces pombe (fission yeast): 2543676
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Entry
2543676 CDS
T00076
Symbol
brr2, SPOM_SPAC9.03C
Name
(RefSeq) U5 snRNP complex subunit Brr2
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2543676 (brr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spo03041
]
2543676 (brr2)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
2543676 (brr2)
Spliceosome [BR:
spo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
2543676 (brr2)
Complex C
U5 SnRNP specific factors
2543676 (brr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
AAA_22
nSTAND3
DEXQc_Suv3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
2543676
NCBI-ProteinID:
NP_593346
PomBase:
SPAC9.03c
SPAC9.03c.1
UniProt:
Q9UT24
LinkDB
All DBs
Position
I:complement(1458729..1465259)
Genome browser
AA seq
2176 aa
AA seq
DB search
MSSAHPKGDSKEPPKHGNSKEKPNYGQSQYSYSAMSNLVTQADRRFVSRRDAEPTGEPES
LVNRVSIADMGSRARIEKPSTLPLELTQEVQEVRLPRKDAESLEIGIRQPEREKRSSAIL
KYFDSFEILKYNPLTDETREVYDYILSFIQQYLGDQSPEILRSAADLIIELLKDSSLDEQ
GRKKQIEEVLSTELPQDRFSQLVNLGNRLTDYTVEQEEELNEEGVNESGVPVLFNEADEE
EEAVEAMEEDEVAEDEDVVLETSISQEEEKKNIENPDTEVTFISADTKKVTEIPTVHPRE
IDAFWLQREIAKYFADAVVCQEKTNQAFEALSADYDLGELENELMSIFDYEHFYLVQLLT
KNRWTIVSCTMLKRAATDEERLGVEEQIRAAGRSWILEALRPGAITIPDDGLNELNNNVV
EKAEPAPVSEIPLSKTLTSHKIVPKHQVDLENYVFTEGSRLMSNKAVKLPEGSFRRTGKG
YEEIHVPAPNKAVLGADERLVKIKELPEWSHQAFLNTQSLNRIQSHLYPIAFGTDENILL
CAPTGAGKTNVAMLCILNELQKHLREDLSFNLQNFKIVYIAPLKALVQEMVNNFSKRLTP
YNIRVAELTGDSQLTKQQISETQIIVTTPEKWDIITRKANDLSYVNLVRLVIIDEVHLLH
DERGPVLESIVARIFRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLFYFDSTYR
PCPLKQEFIGITEKTPFKRMQTTNEACYEKVMQHAGKNQVLIFVHSRKETAKTARFIRDK
ALEEETIGHLLRSDAASREILRAEADSTSDENLKDLLPYGFAIHHAGMRREDRQTSEDLF
ADGTIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGIWTELSPQDVLQMLGRAGRPQF
DTYGEGIIITAHSELQYYLSLMNQQLPIESQFMRRLADCLNAEVSLGTVRSIEDGVDWLG
YTYLYVRMLRSPALYSVGPEYDDDKYLVQKRADLLHSAAILLEKCKLLVYNRQSGTLTAT
ELGKVAASYYVTHNSMAIYNRLLMQTTSFIELFRVFSFSDEFKHIPVREEEKVELAKLLE
RVPIPIRERLDEPAAKINALLQSYISRQRLDGFALVADMVYVTQSAGRIMRAIFEISLRR
GWSSVATLSLDTCKMIEKRLWPTMSPLRQFPNCPSEVIRRVEKKEFPWQRYFDLDPAELG
ELVGVPKEGRRVYNMVQSFPRLSVEAHVQPITRSLVRVELVINSQFNWDDHLSGTSEAFW
ILVEDVDGDRLLHYEQFFLLKKYKDDEHIVNFTVPLLEPLPPCYFIKIVSDRWLHSITKV
PLSFQRLIMPEKFPAPTPLLDLQNAPVSSLNNPSFISLYPNFKFFNKIQTQVFNSVYKTN
DSVFIGAPNGSGKTVCAELALLHHWSQEDYGTAVYIAPIQEIVDRRYEEWYGKFSDLGDG
KVLVKLTGERSQDLKLIQVADLIFCTPSQWDSLSKRWRSMRSIQKVDFYICDELQLLGGF
YGPLYEIVISRIRYMAVQLEKNIRVVGLSVSVANARDLGEWLGTSPQCIFNFSPKDRPNP
LTIHLQSFSITHFPSLMLAMSKPIYRSLKNFISQRKSTIVFTPDRKVAKQLAFDLVTFSM
ADEDEYLFSLMENEAFNKVEDAALQQSLKHGIAYISEITSSNDQNIVQYLYRHGLIKVLI
ASRDVIYSLKAKSNAVIVMGTQYYDGKEHRYIDYPISELLQMLGFTASIGSSELSQVILM
TVTTKKEYYKKFLNEPLPMESHLQVWLHDAFVSEISTQTIESKQDAVDWLTWSYMYRRLV
ANPAYYGLQDITHESVSEFLSDLVETTMNDLSEARLITVDDEDDSCVALNLAMIASHYGI
TYITMQTFALSLSERTKMKGLLEIVTSAAEYEQLPIRKYEDIVLERIHSRLPVRLSNPNY
EDPHTKSFILLAAHFSRFELPPGLVIDQKFILTRVHNLLGACVDTLSSEGHLIACIRPME
MSQMVTQALWDRDSPLKQIPYFDDALIERCNKEGVHDVFDIIDLDDEKRTELLHMDNAHL
AKCAEFINKYPDIDIDFEIEDSEDVHANSPSVLIVQLTRELEEDEEVDTTVIAPYFPAQK
TEHWWLVISDDKTLLAIKKITLGRSLTTKMEFVPPAMGTLKYKLSCFSDSYMGVDYEKEF
ECNVLEPLDTEMEDGE
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgcacatcctaaaggggactcgaaagagcctcccaaacatggaaatagtaag
gagaagccaaactatggtcaatcacagtatagttattctgcaatgtcaaatttggttacg
caggctgatcgaagatttgtgtcacgacgtgatgctgaacctacaggcgaaccggaatct
ctggtaaatcgagttagtattgcagatatgggttctagagcgagaattgaaaaacctagt
acccttcctctcgaattgacgcaggaagttcaggaggtccggttacctcgtaaagatgca
gaatccttagaaattggtatacggcaacctgaacgcgaaaagcgctcttcagcgatactt
aaatattttgattcttttgaaattttgaaatataatcctctaaccgacgagacccgagaa
gtttatgattatatcttgagtttcattcaacaataccttggcgatcagtctcctgaaatc
ctccgttctgctgctgatttgattattgaacttcttaaggatagttctttagatgaacaa
ggtcgtaaaaagcaaatagaggaggttttgagtactgaactcccacaggatcggttttca
cagctcgttaacttgggaaatcgcttaacagattatacagttgagcaagaagaagagtta
aatgaagaaggcgttaatgaatctggcgtaccagtattgttcaatgaagccgatgaagag
gaagaagctgttgaggcaatggaagaggatgaagtggcagaagatgaagacgtcgtctta
gaaacttccatatctcaagaagaagagaaaaagaatattgaaaatccggatacagaggtt
acatttatttctgctgataccaaaaaagttaccgaaatacccactgttcatcctcgtgaa
atcgatgcattttggctgcaacgagaaatagcaaaatattttgctgacgccgtcgtttgt
caggaaaaaacaaatcaagcgtttgaggcactttcggctgattacgatctcggtgaattg
gaaaatgaattgatgagtatttttgattatgaacatttctatcttgttcaacttttgact
aagaatcgttggacaatagtttcgtgtacaatgttaaaacgcgccgctactgatgaagaa
cgcttaggtgtggaagagcaaattcgtgctgctggtcggtcttggattctcgaagctcta
cgccctggtgctatcactatacctgatgacggtttaaatgaattaaataataatgttgtt
gagaaagctgaacctgcgcccgtttctgaaattccactttcgaaaactttgacttcccat
aaaattgtacctaagcaccaagttgatctagaaaattatgtgtttactgagggatcacgt
ctcatgtctaataaagctgtcaagctacctgaaggctcgtttcgtaggactggtaaaggg
tatgaagaaatacatgttcctgcccccaacaaagccgtacttggcgctgacgagcgtctt
gtaaaaatcaaggaactgcctgaatggtctcatcaagcttttcttaatactcaatcttta
aaccgaatccaaagccatctttatcctatcgcttttggtactgacgaaaacatcctttta
tgcgctcctactggtgctggaaaaacaaatgtagcaatgctatgtatccttaacgaatta
caaaaacatttacgtgaagatcttagctttaacttacaaaattttaaaattgtttacatt
gctcccttgaaggcgttggtacaagagatggttaataatttctcaaagaggcttactcca
tacaatattcgagtcgcagagttaactggtgatagtcaattgactaaacaacaaattagt
gaaactcaaataattgtaaccacacccgagaagtgggatattataactcgaaaagctaat
gatttatcttatgtcaatctagtccgtttagttattattgatgaggttcatttgcttcat
gatgaacgaggtcctgtattagaatctatagttgctcgtatatttcgccatcaggaggaa
actcttgaacaagttcgattagtaggtttgtctgctacacttcctaattataccgatgtt
gccagttttttacatgtcgaccctaaaaaagggcttttttacttcgattcgacatatcgt
ccatgccctttaaagcaagaatttataggcattacagaaaaaacaccgtttaaacgaatg
cagacgactaatgaagcttgttatgaaaaagttatgcaacacgctggcaaaaaccaggtc
ctcatatttgtacattcgcgcaaagaaaccgctaaaaccgctcgttttataagagataag
gcactagaggaagagaccatcggtcatttgttacgctctgatgccgcatcccgtgaaatt
cttcgggctgaagccgactctaccagtgatgaaaatttgaaagatttgctcccatatggg
tttgccatacatcatgctggtatgcgacgagaggatcgccaaacgtctgaagaccttttt
gccgatggtactatacaggtactagtgagtacggcaactctggcttggggcgtaaactta
ccagcgcacacagtgatcatcaaagggacccaagtttattctcctgaaaagggtatctgg
acagaactctctcctcaggatgttttgcaaatgcttggcagagctggtcgcccacaattc
gacacatatggtgaaggaattatcattaccgcccactctgagttacagtattatctatca
ctaatgaatcagcagcttccaattgagtctcaatttatgcgccgtctagctgattgttta
aatgccgaagtatcgttaggaactgttcgtagtatcgaagatggcgtagactggcttggt
tatacatacctctatgttcgaatgttacgatcccctgccctatatagcgtcggcccagag
tatgatgatgacaaatatcttgttcaaaaaagagctgacttacttcattcagctgccatt
ttattagaaaaatgcaagttactagtgtataatcgtcagagtggtacgttgaccgctacg
gaattgggaaaagttgctgcaagttattacgttactcataactcgatggccatatataat
cgtcttttaatgcagacaacatcctttatcgagttatttcgagtcttcagtttttctgat
gaatttaagcacattcctgtccgtgaagaagagaaagttgaactcgcgaagttgctggaa
agagtaccaattcctattagggaaagattagatgaacctgctgccaagattaatgccctt
ctccaatcatatatatcaagacaacgcctggatggatttgcacttgtggcagacatggta
tacgttacgcaatcagcgggtagaattatgcgtgcaatattcgagatatcattgagacgt
ggttggtcatctgttgcaacactctctcttgatacatgcaaaatgattgagaaaaggctt
tggccaactatgagcccccttcgacagtttcccaattgtccttctgaagtaatacgccgc
gttgagaaaaaggaatttccttggcagcgatactttgatctggaccctgctgaattagga
gaattagtaggggtgccaaaagaagggaggcgtgtgtacaacatggttcagtcttttcca
aggttgagcgtcgaagcacatgttcaacctatcacaagatcgcttgtgcgggtcgaactt
gttataaattctcagttcaactgggatgatcatttaagcggcacttctgaagctttttgg
atccttgtagaagacgtggacggggaccgattgctacattatgaacaatttttccttctt
aaaaaatacaaagatgatgagcatattgtaaattttacagtacctttgttagaacctctt
cctccttgttactttataaagatagtttcagatcgatggttacactcgataactaaggta
cctctttcatttcagcgcctgataatgccagaaaaatttcctgcgccaacacctcttctt
gatcttcagaacgccccggtctctagtcttaataacccaagcttcatttccctctaccct
aattttaaattttttaacaagattcaaacacaggtgtttaactctgtttataaaaccaac
gatagtgtttttattggtgctcccaatggaagtggaaagactgtttgtgccgaacttgct
ttgttacatcattggagtcaagaagattatggtactgcagtttacattgccccaattcag
gaaatcgttgatcgtcgatatgaagaatggtatggcaagttttctgacctcggtgatggg
aaagttttggtaaaattgacgggtgagcgttcacaagacttgaagctgatacaagttgct
gacttgatattttgcacgccatcgcaatgggactcattgtcgaagagatggagaagtatg
cgaagcattcagaaagttgatttttatatatgtgatgaattacaattgcttggtggattt
tatggtccattatacgaaatagtgatctcacggatacggtacatggcagtacaattagaa
aaaaatatccgagtggttggcctttcagtatctgttgctaatgctcgagatttgggtgag
tggcttgggactagtccacaatgcatatttaattttagtcctaaagacaggcctaatcct
cttactattcatttgcaatcattcagtattactcatttcccttcccttatgttggctatg
agcaagcctatatatcgcagcttgaagaactttatttctcagagaaagtctactattgta
tttactcctgacaggaaagtagcgaaacaattagcttttgatttagttacattcagtatg
gctgatgaagatgagtatttgttttcgttaatggagaatgaagctttcaataaagttgaa
gatgctgccttgcagcaatcattgaagcatggtattgcttatattagtgaaatcacatcg
tccaatgatcagaatattgtacaatatctttaccgtcatggacttatcaaggttttgata
gcttctcgcgatgttatttattccttaaaagcaaaatcaaacgctgttattgtgatgggt
actcaatactatgatggcaaagaacatcgttatattgattatcctataagtgagttatta
caaatgctcgggtttactgctagcattggatcaagtgagcttagccaggttattcttatg
actgtcactactaagaaggaatattacaagaaatttttaaatgagccattacccatggaa
agccatcttcaagtttggctgcacgatgctttcgtgtcagaaatatctacgcaaaccatt
gaaagcaaacaagatgctgtagattggcttacatggtcgtatatgtaccggagactagtt
gccaatcctgcctattatggtcttcaagatatcactcatgagtcggtttctgaattcctt
tcggatcttgtagaaacaaccatgaatgatttgagtgaggcacgcttaatcactgtagac
gatgaggatgatagttgtgtcgcattaaatttagcaatgatagcttctcattacggaatt
acatacattactatgcaaacgtttgctttgagcttgtcagagcgcacgaagatgaaggga
ttactagaaattgttacatcagcagcagaatatgagcaactcccaattcgaaagtatgaa
gatattgtgctggagcgaattcattcccgcctgcctgttcgcttaagtaatcctaactat
gaagatcctcatacgaaatcatttattcttcttgcagctcatttttctagatttgaattg
cctcctggtttagttatagatcagaaattcattttgactagggtacataatcttctgggc
gcttgtgttgatacattgtcttccgaaggccatttaatagcttgtattagaccaatggag
atgtcgcaaatggttacgcaagctttatgggatcgtgatagtcctttaaaacagataccc
tatttcgacgacgctttaatcgaacgatgcaataaagagggtgttcatgatgtctttgat
attatcgatttggatgacgaaaaacgtactgaattgttacatatggataatgcacatctt
gccaaatgcgcagagtttatcaataaatatccggatattgacattgattttgaaatagaa
gactctgaagatgttcacgctaattcaccctctgtgcttattgttcaactaactcgagaa
ctggaagaggatgaagaagttgatacgactgtcattgctccttactttccagctcaaaaa
actgaacattggtggcttgtaatttcggatgacaaaaccctcttggcaattaagaagatt
accttaggtaggtccttgactaccaagatggaatttgtgcccccggcaatgggaacttta
aaatataaactgagctgctttagcgattcttatatgggtgtggattatgaaaaagaattt
gaatgcaacgttttggaacctttggacacagaaatggaagacggggaataa
DBGET
integrated database retrieval system
