Schizosaccharomyces pombe (fission yeast): 3361412
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Entry
3361412 CDS
T00076
Symbol
SPOM_SPAC25G10.01
Name
(RefSeq) mRNA splicing or mRNA surveillance facor
KO
K12897
transformer-2 protein
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
3361412 (SPOM_SPAC25G10.01)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spo01009
]
3361412 (SPOM_SPAC25G10.01)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spo03041
]
3361412 (SPOM_SPAC25G10.01)
Protein phosphatases and associated proteins [BR:
spo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
3361412 (SPOM_SPAC25G10.01)
Spliceosome [BR:
spo03041
]
Common components
Common spliceosomal components
SR proteins
3361412 (SPOM_SPAC25G10.01)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
DUF7319
RRM_7
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
3361412
NCBI-ProteinID:
NP_001342863
PomBase:
SPAC25G10.01
SPAC25G10.01.1
LinkDB
All DBs
Position
I:4295376..4296269
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AA seq
297 aa
AA seq
DB search
MDTLPPATSEESFEIPNADVAGSAVLETETSQDIHQLEIEKDAGETDSDAGSIAMNVHQL
DTAGEPLQSMNEDEVDPNNESTALDKKEPQSAPEGSENLGNDLFVSGIASRMQEDELQQI
FSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNLNSQEFYGRVLNVQKAKRS
RPHSPTPGKYMGYDRRRNSRDFPSNNKDGGYRRNNYRDRDSNRYRNSYRPSRPQREHSPG
NYRKERYNVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTPGNEALPSHSSVPPNEDQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggatactctacctcccgcgacatctgaggaatcatttgaaatcccaaacgccgacgta
gctggttcggcagttttagaaacggaaacttctcaggatatacaccaacttgagattgag
aaagatgctggggagacagactctgacgcagggtctattgctatgaatgtacaccagctt
gacactgcgggggaacctttgcagtcgatgaacgaagatgaagtcgacccgaacaatgaa
tctactgctctcgataagaaagagccgcaaagcgctcctgaaggatccgaaaatctaggc
aatgatttatttgttagtggaattgcttccagaatgcaagaggacgagcttcagcaaatc
ttctccaagtttggtactgttactcatgtgagaatcatgagagaaccagttacaaaagct
tcaaggggttttgggttcttatcattttcaactgttgaggaagcaacctcagctattgac
aatttgaactctcaggaattttacggacgagtacttaacgttcagaaagccaagcgatct
cgccctcattctccaactccaggaaaatatatgggctatgatagaagaagaaattccagg
gattttccaagcaacaataaagatgggggatatcgtagaaataattatcgtgaccgcgat
tctaatagatatcgaaactcttatcgtccatctaggcctcaacgagaacattctcccgga
aattaccgcaaagaaagatacaacgttgattcaagaccgagaagagagcgacatttccat
ggaaggtcctttgctcatgcagagcatcattctgttcctaacatgcgcaatgatacccca
ggtaatgaagccttaccttcacactcttcggtgcctccaaacgaagatcaataa
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