Schizosaccharomyces pombe (fission yeast): SPAC13F5.02c
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Entry
SPAC13F5.02c CDS
T00076
Symbol
ptr6
Name
(RefSeq) transcription factor TFIID complex subunit Taf7
KO
K03132
transcription initiation factor TFIID subunit 7
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPAC13F5.02c (ptr6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
SPAC13F5.02c (ptr6)
03036 Chromosome and associated proteins [BR:
spo03036
]
SPAC13F5.02c (ptr6)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SPAC13F5.02c (ptr6)
Coactivators
SAGA/TFTC/STAGA complex
SPAC13F5.02c (ptr6)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
SPAC13F5.02c (ptr6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII55_N
Ribosomal_60s
DUF2201_N
BSP_II
Spore_coat_CotO
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
2542822
NCBI-ProteinID:
NP_593650
PomBase:
SPAC13F5.02c
UniProt:
O13701
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All DBs
Position
I:complement(2172410..2173796)
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AA seq
393 aa
AA seq
DB search
MVKLKIRAVQPPPNDSRSSTPATGPPPPIPKIKIKTREPKGPRLTKIRLKRVREPGLGYD
SEASDREEDTYIEEQIILRLPPGEDCEYVRKAIENREVGRGADIWVKFKDQRRAVVHVNG
HLYAAKLVDLPCIIESNKSFDKKVIFKAADICQMLIATERIEHENSVLNTQLKQADYIYP
HGLTTPMHWVRQKRFRKRVSNRTIEAVENEVDRLLAMDERAESTSNELIDQAQLARDSSI
ALSEDTSFDGMAGLRGTSIDRDDQSVQTDMFDGMDEDDLAGQIEQGMLELSQDTRESTAE
PRAAGEESASEEEEEEEEEEEEENEADDETRENKRQNRLVREFISELESSIQKRRKDADE
ATNPILRNRFLADVNRMVTELELKRTQLVDNPE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggttaagctaaaaattcgtgctgttcagcctcctccaaatgattcacgatctagcact
ccagccactggtcctcctcccccaattcctaaaattaagatcaagacacgtgaacctaaa
ggccctcgattgacaaaaattcggttaaaaagagttcgcgaacctggcttaggatatgat
tcagaagcttctgacagagaagaagacacttatattgaagaacaaattatattacgtctt
cctcctggtgaagattgtgagtatgttcgaaaagcaattgaaaatagggaagtgggacga
ggtgcagacatatgggtgaagttcaaagatcaaagaagagcggttgttcatgttaatggt
catttgtacgctgcgaagttagttgatttgccatgcatcatagaatctaataaatcattc
gacaaaaaagttatcttcaaggctgctgacatctgtcaaatgttgatagctacagaaaga
atcgagcacgaaaattctgttctcaatactcagttaaagcaagctgattacatttatcca
catggattgacgacgccaatgcattgggtgcggcagaagcgatttcgaaaacgtgtttcg
aacagaacaatcgaagcagttgaaaatgaggttgaccgattgcttgcaatggatgaacgc
gctgaaagtacatcgaatgagttgattgatcaagcacaattggctcgtgactcaagcatc
gctctttcagaggatacatcgtttgatggaatggcaggacttcgtggtaccagcatcgat
cgggacgaccaaagcgtgcaaactgatatgtttgatggtatggatgaggacgatttggct
ggacagattgaacagggtatgcttgagcttagtcaagatactcgggagtcaacagcagaa
cctcgtgccgcaggtgaagaatctgctagtgaagaagaagaagaggaggaagaagaagaa
gaagaggaaaatgaagctgacgatgagactcgcgaaaataaacgacaaaatagacttgtt
cgtgagtttatttcagagttggagtcttctattcaaaaacgtagaaaggatgccgatgaa
gcaactaatcccattctacgaaatcgtttccttgcagacgttaatcgtatggtgaccgag
ttagagttaaaacgtactcaacttgtcgataaccctgaataa
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