Schizosaccharomyces pombe (fission yeast): SPAC17G6.10
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Entry
SPAC17G6.10 CDS
T00076
Symbol
ssr1
Name
(RefSeq) SWI/SNF and RSC complex subunit Ssr1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SPAC17G6.10 (ssr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
SPAC17G6.10 (ssr1)
03036 Chromosome and associated proteins [BR:
spo03036
]
SPAC17G6.10 (ssr1)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
SPAC17G6.10 (ssr1)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
SPAC17G6.10 (ssr1)
PBAF complex
SPAC17G6.10 (ssr1)
GBAF(ncBAF) complex
SPAC17G6.10 (ssr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
ZZ
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
2542400
NCBI-ProteinID:
NP_594257
PomBase:
SPAC17G6.10
Ensembl:
SPAC17G6.10
UniProt:
O13788
LinkDB
All DBs
Position
I:3605621..3607454
Genome browser
AA seq
527 aa
AA seq
DB search
MSNVTENKHDLHENGVPDSAQPMELDVSKKEDTEPEVRDEAKEFLLSQLPQVEVPEWAQW
FDFSKVHEIEKKQNPEFFDGKNTSKTPEVYKEYRDFMISTFRLNSKVYLTFTACRRNLAG
DVCAVLRVHRFLEQWGLINYNVNPDTRPSKIGPPSTSHFQILADTPRGLVPLLPPPSSSI
PRSKAVTIEDPSIVRTNIYDPSLDDVLKGKGSTPNQKPSLSNLHENNIDQSDSPQHCYCC
GNKFNESYYQSQTAQKYNVCISCYQQNRFPSPTTIADYKEVAIQNKIEDDDTWTAQELVL
LSEGVEMYSDDWAKVASHVNTKSVEECILKFLNLPSSDKALFKMDKVHTNPVVDSLQGKN
PILSVVSFLAKMVPPSSFTQKSSAKEEESDKVKGESVYPKPESESYDVEMNGKSLEDSDS
LSELYLTNEEKKMASIIKDSVNVQIKLIESKLSHFDYLDQHIRLKSQELDAFAQATYREK
LYMKRECQNARKKIEQQLQSKDTAANGLPVQSSAETSVIPASSMSPS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgttactgaaaataaacatgacttacacgaaaacggggtaccagattctgct
cagccaatggaattggatgtttctaaaaaggaggacactgaaccagaagtcagagacgag
gccaaagaatttttgttgagccagttaccacaagtagaagtccctgagtgggcgcaatgg
tttgatttctctaaagttcacgaaattgagaaaaaacaaaaccctgagttctttgatgga
aaaaatacgtcgaaaacaccagaggtatataaggaataccgagattttatgattagtact
tttcgattgaactccaaagtttatttgactttcacggcttgccgaaggaatttggctggt
gatgtatgtgctgtcttgcgtgtccatagatttctagagcaatggggattaatcaactat
aacgttaaccccgatactcggccttcgaaaataggtcccccttccacaagtcatttccaa
atccttgctgatactcctcgtggattggtaccacttcttccacctccctcttcttcaatt
cctcgttccaaagctgttaccattgaagatccttcgattgtccgaacaaatatttatgat
ccctctctcgacgatgtcttaaaaggtaagggttcaactccgaatcaaaaaccaagcctt
tcgaaccttcatgaaaacaacattgatcagtcagattctccacagcattgttactgttgc
ggtaataaatttaatgaaagttactaccaatctcaaacggcccaaaaatataacgtttgt
ataagttgctaccaacaaaatcggtttccttcaccgaccacaattgctgattataaggag
gtcgcaatacaaaataaaattgaagatgatgatacatggactgcacaagaacttgttctt
ttgtcagagggagtggaaatgtatagtgacgactgggcaaaggttgcttctcatgtgaac
acaaaaagtgttgaagagtgtattttgaaattccttaatcttccttcttccgacaaagct
ttatttaaaatggacaaagtgcataccaatcctgtggttgattctttgcaggggaagaac
cctattttatccgtagtctctttcttagccaaaatggtaccaccttcttctttcacacag
aaaagcagcgcaaaagaggaggagtcggataaagttaaaggtgaatcggtttatcccaaa
ccagagtcagaaagttatgatgtcgagatgaatggtaaatcattggaggactctgatagt
ctatcagagttatatctaactaatgaagaaaagaaaatggcttctattataaaggattct
gttaacgtgcaaattaagctaattgaatccaagttatctcattttgattatcttgatcag
cacattcgtcttaaatcccaagaattagatgcctttgcacaggcaacttatagggaaaaa
ttgtatatgaaacgagagtgtcaaaatgcccgcaaaaaaatagagcaacaactacaatcg
aaggatactgccgcaaatggtctaccagttcaaagctccgctgaaacttctgttatccca
gcttcttctatgagtccttcttaa
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