Schizosaccharomyces pombe (fission yeast): SPAC694.02
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Entry
SPAC694.02 CDS
T00076
Name
(RefSeq) DEAD/DEAH box helicase
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
SPAC694.02
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPAC694.02
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
SPAC694.02
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
PhoH
Motif
Other DBs
NCBI-GeneID:
2543333
NCBI-ProteinID:
NP_594482
PomBase:
SPAC694.02
Ensembl:
SPAC694.02
UniProt:
Q9P7T8
S6BSJ4
LinkDB
All DBs
Position
I:4200148..4205612
Genome browser
AA seq
1717 aa
AA seq
DB search
MSEEIAKLTTVQNYRLVDLIGDFAGEELFLIDGDSLIFHILAKDSQFLAKNGVQILYAIY
LLEKELARFKSARLNFCIVFFKNWEALYSQYDGILHASLLLFRRVAIRHLRKHVPVYVFK
SLGDSQWSIFIAKHRPYGFMVLDSNQNTKEGGLVISDEQVMVFKSFIFFALSDGVPVALL
GSYQFVDNKILVCILPSFFTRSSESVENASNLISDYLKKFGKPRQSIELPDIAVDACPSN
ASRIQTLSAAWLLLNEKSDLNVDLCKILIILTCMLEELSLNDRFQPAFPLYEDPAIQKFI
ISYLNATNTILQLLDSKVDGFHDIFDGRLFIRLVVDAALGEFCIPDICRESALSLWKLIL
DIAPDAGDLFDFPSLSSISKDLCVPIETPVSEIDISLTAYNDPVISPYYDTEEWNLEQRE
EPGIETVLDFSKLRINDKTMTSKRFDDLSATRKTGDNTKDRKQANKVRRQDQFFISHIQK
YASSLTGAKGGQLKRQTIFTQGPNSTKESKQAVKEETSVKNSPKGKNTKNGKAEKEKPGK
KSKAPKLSKAEQIRAEIAARKVEKEENKNEVIWNETKNDLGRIKDLNLRAGRLAQLLNTR
TYDPYIENEMRLYRIRVLLSLWTACCVTDEGKEKNIKIAVEIFREISIVYPNPITKQVKA
ALDETLTALGFENVIRKMKKLESKPLSFPFVLPDLEDEEFDLEVPYTSPTFQLLHFGEYM
ERSMGSAPDSRVAFDPDEWQRETLDILDRDESVFVVAPTSSGKTFISFYAMEKVLRDNDD
GVVIYVAPTKALVNQLSAEVYARFNKHYPHAGQTVWSVYTRDYRINNPTNCQVLITVPHV
LQSMLLQPALANAWCPKIRRIIFDEIHCIGQMEDGLVEEQLLLLAPCPIVALSATVGNPQ
EFQVWLSALQRAHSYPIHLIVHEHRYSDLRKFVYGGAKEFNGLQEEGDLGQIAFIHPAAA
MSFSDGSTTNLAFEPRDCLQLYYAMKLVSKGDFKISRKLDPDRYFEDIPFIKKVDAVGYE
KKIKATIDTWASLPNAFAPNSPFQALIKHFCSEPQKVVNSQLELHNSAYSLDAISQNLLP
MLKDLHSKELLPAICFNYDRQECEYLAEIVFKTLVEKEREWRENSEEWKEKMREYKKWQS
TANQRAKQMEKFEKSATEKQKEQALKEAGDISWIEFFDPEEPSPEFSFAGAKSTYGKEEL
YRDLEALRRRQAVPEWYVDALYRGIGIHHSGLNRRYRQIVEVLFRCGQLTVVIATRTLSL
GINMPCRTVVFLGDSLQLNALNFHQAAGRAGRRGFDLLGHVGFLGVPLHKIYRLLTTKLW
DIQGQFPLTTSLVLQLSQLISGSQAGPFARDTIHALMDEPKFMANGSILSNQVNHHLRFV
IEYLRREGLLDVYGNPINLASLTMHLYYTEPSNYAFMNLLKAGVFHKIAEKFATEKFEAM
RDTVVILCHLFGRIRMNEQYVMTLEGSTDLAQSTVVLPPLPTEIADVLDAHDQRVLDLYK
TYAWYYQKHGNIGVAANKLPLSNTTIEGSAKLPSSLSVGVMSEFCGLAGYNESMVGTTSS
FLDKVPDGIFLKTSRLPIFEANKAPYNAYLLDFFTHGSVDMLIEQNNLKQSEIWFVLNDF
SLVLATICSCLGNLLNLVTDEDIENAMSALEGSNAVQATTESEATGADWMQNMNGNYSTT
LASPELEEKMDMNLFKVYCMFLEVRNQFDAKFRKMWA
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggagatagccaaattaacgacggttcagaactatcgtctagtagacttaatc
ggtgattttgctggagaggaactttttcttatcgatggagattccttgattttccatatt
ttggcaaaagattctcaatttttagccaagaatggtgttcaaattttatatgctatttac
cttttggagaaggaattagcgcgatttaagagtgctagactaaatttttgtatagtattc
tttaaaaattgggaagctttatactcccaatacgatgggattttgcatgcgtcgttactc
ctctttcgtagagtggctatccgccatcttcgcaagcatgtccctgtatatgttttcaaa
tctttaggagattctcaatggagcatatttattgcaaagcatcgtccatatggatttatg
gttcttgatagcaaccaaaatacaaaggaagggggtttagttatatcagatgagcaagtg
atggtatttaaatcattcattttctttgctctttctgatggtgtacctgtcgctcttttg
ggctcttaccaatttgtagacaataaaatcttagtctgtatattgccttcattctttaca
cgatccagtgaatctgttgaaaacgcttctaatctcatctctgattatttaaagaagttt
ggcaagcctcgtcagtctattgaactacccgatattgctgtcgatgcttgtccttcaaac
gcgtcacgcatccaaaccctttctgcagcgtggttgctgttgaatgaaaaatcagatctt
aatgtcgatctctgcaaaattctcatcatcttaacctgcatgcttgaagaattaagcttg
aacgatcgcttccaacctgccttccctctttatgaggatcctgcaattcagaaatttatt
attagctatctgaatgctacaaatacaatccttcagctgttggattccaaagtagatgga
ttccatgatattttcgacggtcgcctctttatccgacttgttgttgatgctgcgttgggc
gaattttgtattcctgatatttgtcgagaatccgctctttctttatggaagcttatttta
gatattgctcccgatgcaggtgacttgtttgattttcctagcctttcttcaatttccaag
gatctgtgtgtacccattgaaactcctgtaagcgaaattgatatatctttgactgcctac
aatgatcccgttatctccccttattatgatacagaggagtggaatcttgaacaaagggag
gaacctggcattgaaactgttttggacttctcaaaacttcgaatcaatgacaaaaccatg
acatccaagcgcttcgatgatttgagtgccactcgcaaaaccggtgataatactaaagac
cgcaaacaggcgaataaagtacgtagacaagatcagttctttattagtcatattcaaaaa
tatgcaagctctttgactggtgctaaaggtggtcaactgaaacgtcaaaccatttttacg
caaggccccaactctacaaaggagtcaaagcaggcagtcaaagaagaaactagtgtcaaa
aattcacctaaagggaaaaacacgaaaaacggtaaggctgagaaggaaaagcctggaaaa
aagagtaaagctcctaaattatccaaagccgagcaaattcgcgctgaaattgcagcacga
aaagttgagaaagaagagaataaaaacgaggttatttggaatgaaactaaaaatgatttg
ggtcgtattaaagatttaaaccttcgtgctggccgtcttgctcagcttttgaatacaaga
acgtatgacccgtatatcgagaacgaaatgcgtctatatcgcattcgtgtattactttct
ttatggaccgcgtgctgtgtaaccgatgaaggaaaagagaagaacattaagattgctgtc
gaaattttccgcgaaataagtatcgtttatccaaatcctattacgaagcaagtgaaagca
gctctggacgaaacacttactgcgttaggatttgaaaacgtaattagaaaaatgaaaaaa
ttagagtcgaagcctctttcgtttccatttgtgttacctgatttggaggatgaagaattt
gaccttgaggttccctatacttctcctacgttccaacttctccattttggtgaatacatg
gagaggtcgatgggtagtgctcctgatagccgtgttgcattcgatccggatgaatggcaa
cgtgaaactcttgacatactggatcgcgatgagtctgtatttgttgtagctccaacatct
tctggtaaaacctttatttcgttttatgcgatggaaaaagttttacgtgacaatgatgat
ggagtcgttatttatgttgcacctactaaagcattagtcaatcaactttctgcggaagtt
tatgctcgtttcaacaagcattatcctcatgctggtcaaactgtttggtctgtttatact
cgtgactaccgtattaataaccccacaaattgtcaagttcttattactgttccccacgtg
cttcaaagcatgttgttgcaaccagctttggccaatgcatggtgccctaagattaggcgc
atcatttttgatgaaattcactgtattggtcaaatggaagatggactagttgaagaacag
ctattgttattagctccttgtcccattgttgccctatcagctacggtcggtaacccacag
gaatttcaagtatggctttctgctttgcaaagggctcactcttatccaattcatttgatt
gttcatgagcatcgttattctgatcttcgtaagtttgtatatggaggtgccaaggaattt
aatggtttgcaagaagaaggcgacctcggacaaattgcatttattcatcctgctgccgcc
atgtctttctctgatggatctacaacgaatcttgcattcgaaccacgcgattgcttacag
ctgtactatgcaatgaagttagtttccaagggtgatttcaaaattagtagaaagcttgat
cctgacaggtactttgaggacatcccctttattaagaaggttgatgccgtcggttacgag
aagaagattaaggctacaattgacacttgggcgtctttgcctaatgcctttgcccctaac
tcaccattccaagctcttattaagcacttttgtagtgagccacaaaaggttgttaatagt
caattagaactgcataactctgcctattctttagatgccatatcccaaaaccttttgcca
atgttaaaggatcttcatagtaaggagctacttcctgctatctgttttaactatgatcgt
caggaatgtgaataccttgctgaaatcgtttttaagacattggttgagaaggagagagag
tggcgtgaaaattccgaggagtggaaagagaaaatgcgtgaatataaaaaatggcaatcc
actgctaaccaaagagccaaacagatggaaaaatttgagaagagtgctactgagaaacaa
aaagaacaagcgttaaaagaagccggtgatatcagttggattgagtttttcgaccctgag
gagccttctcccgagttttcttttgctggtgcgaagtcaacctatggtaaagaagaactt
tatcgagatttagaagccttgcgtagacgtcaagctgttcctgaatggtatgttgatgct
ttataccgtggtattggtattcatcattctggtcttaacagacgttaccgtcaaatcgtc
gaagttttgtttagatgtggtcagcttacagttgtaattgctactcgtacactctctctt
ggtatcaacatgccatgccgaactgtggtatttttgggagatagtttacagcttaacgcc
ttgaatttccatcaagccgctggtcgtgctggtcgtcgtggttttgatcttctaggtcat
gtcggtttcttgggcgtacctttgcacaaaatctatcgtcttttgactacaaagctatgg
gatatccagggtcaatttcctcttactacttctttggttttgcagctatctcagcttatt
tctgggtctcaagcaggcccttttgcccgtgataccattcatgcgctcatggacgagcca
aaatttatggctaatggatccattttgagcaatcaagttaaccatcatcttcgctttgtc
attgagtaccttcgtcgtgaaggactgttagatgtttatggtaaccctataaatcttgct
tcactaaccatgcatttatattacactgaaccaagcaattatgcattcatgaatcttttg
aaagctggtgtattccataaaattgctgagaagtttgctactgagaaattcgaagccatg
cgtgacaccgtcgtaatcttgtgtcatctttttggtcgtattcgcatgaacgagcaatac
gttatgacattggaaggaagcacggatcttgcacagtctacagttgttttacctcctctt
ccaacggaaattgccgatgttttagatgcccatgatcagcgagtacttgacctttacaag
acttacgcttggtactatcaaaagcatggtaatattggtgtggcagcaaataagcttcca
ttatcgaataccaccattgagggttcagccaaattaccctcttcattatccgtaggcgta
atgtccgaattttgtgggttagcaggatataacgagagcatggtcggtactacctcaagc
ttcttggacaaagttccagatggcattttcttgaagacttctagacttccaatatttgaa
gccaacaaggccccttataatgcttatttactcgatttctttactcatggaagtgtcgat
atgctgattgaacaaaataatttgaagcagtctgaaatttggtttgtacttaatgatttc
agtttggtccttgctaccatctgcagttgccttggcaatctattaaatctcgtaactgat
gaagatattgaaaatgctatgagtgcacttgaaggctccaacgctgttcaagccaccact
gaaagcgaggccaccggagctgactggatgcaaaacatgaatggtaattattcaactacc
ttggcctctcctgaattggaggagaaaatggacatgaatcttttcaaggtatactgcatg
tttttggaagtacgtaatcaatttgacgctaaattcagaaagatgtgggcataa
DBGET
integrated database retrieval system
