Acidilutibacter cellobiosedens: EQM13_00050
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Entry
EQM13_00050 CDS
T05805
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
spoa
Acidilutibacter cellobiosedens
Brite
KEGG Orthology (KO) [BR:
spoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spoa03021
]
EQM13_00050
Transcription machinery [BR:
spoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EQM13_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
HTH_10
HTH_3
GerE
Sigma70_r4_2
HTH_23
MarR
KORA
RecQ-1-like_HTH
HTH_24
Trp_repressor
HTH_17
LacI
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QAT60077
UniProt:
A0A410Q7V3
LinkDB
All DBs
Position
9482..10273
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AA seq
263 aa
AA seq
DB search
MINDGCCEQKKLENLKEIDTKTLFNKFKQTKDLEIRNELIERHLYIAQILSKKYVNRGIE
YDDIYQVACIGLIYAIDRYDLDKGFEFSSFATPTIIGEIKKYFRDKGWAIRVPRRIQELS
KKINNSKVVLSQKLQRSPTVEDIADYLNISKEEVLEAMEASKVYTPQSLDITYDSNSDDK
DVNLSELIGEEDFYFRKIENNDFLMRIVDKFNKVEKKIFFDRYFNKKTQVAIAESLGISQ
MTVSRVEKKIMGKLKKEFQKTLE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgatggctgctgtgaacaaaaaaaacttgagaacttgaaagaaatagataca
aaaactttatttaataaatttaaacaaactaaagatttggaaataagaaatgaactaata
gaaaggcatctttatattgcacagatactttcaaaaaaatatgttaacagaggaatagaa
tatgatgatatttatcaagtagcttgtattggattgatatatgctatagataggtatgac
ttagataaaggttttgaattttcaagttttgctactccgacaattattggtgaaataaaa
aaatatttcagagataagggatgggctattagagttccgagaagaattcaagagctttct
aaaaagataaacaattccaaagttgtactcagccaaaaactccagagatcccctactgta
gaagatattgcagattatttaaatattagtaaggaagaagtattggaagccatggaggca
agtaaggtatatacccctcaatctttagatataacttatgattccaatagcgacgataaa
gatgttaatttatccgaactcataggagaagaagatttttattttcgtaagattgaaaat
aatgattttttgatgagaattgtagataagttcaataaagttgaaaagaagatatttttt
gataggtattttaacaaaaaaactcaagtagcaatagcagaaagtcttggaatttcccaa
atgacggtatcaagagtagaaaaaaaaataatgggaaaattaaagaaagagtttcaaaaa
acattagaataa
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