Acidilutibacter cellobiosedens: EQM13_04120
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Entry
EQM13_04120 CDS
T05805
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spoa
Acidilutibacter cellobiosedens
Pathway
spoa03420
Nucleotide excision repair
spoa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EQM13_04120 (pcrA)
03430 Mismatch repair
EQM13_04120 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoa03400
]
EQM13_04120 (pcrA)
Enzymes [BR:
spoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EQM13_04120 (pcrA)
DNA repair and recombination proteins [BR:
spoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EQM13_04120 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
EQM13_04120 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DUF5604
AAA_12
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QAT60823
UniProt:
A0A410QA01
LinkDB
All DBs
Position
867374..869566
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AA seq
730 aa
AA seq
DB search
MDYLQGLNEKQKEGVLHTEGPLLILAGAGSGKTRVITHKIAYLIEEKRVFPSNILAITFT
NKAAKEMKERVEGLLKGRVEDIWMGTFHSMCVRILRREIESIGYKRNFSIYDSLDQKTLV
KECITEKNLNKETFQEKPIINIISSLKDDMIDPDDYINENYKDYYRRNVGEIYGLYEEKL
KKNNALDFDDLILKTVFLLKSDERIREKYQSKFEYIFVDEYQDTNKSQYELIKYLSGKHG
NICVVGDEDQSVYGWRGADIRNILNFERDFKGAEVIKLEQNYRSTGNILDVANSIIKNNT
ERKGKKLWTAKERGQYATLKINFDEKEEANFVTQKVIDLIEEGKYKYGDFVILYRTNAQS
RSFEETFIRNNIPYKIVGGLKFYDRKEVKDLIAYLRLIQNPLDDISLRRIINVPKRGIGA
STLGKIEKYTSQTGESIYGALLDLDKIQGLSGRARNVIKSFTAMINKFLAMKEIMGVRDF
IEEVVYSTGYIKELEEENSVESQSRIENLKEFISVAVDFETNYEGGTLEDFLANVSLLSD
VDKTDERKDVVTMMTVHGAKGLEFPVVFLVGMEEGLFPISRALDSIHDMEEERRLCYVAV
TRAEELLYISYANLRTIYGNTTYSLPSRFLKEIPDDMLKICKNDQRKEKQEDEIEYEERT
DIKNRFEKKVNLKEDIQIGSKVNHKMWGMGTVVQIKKVGEDKEIVVAFENKGLKKLLLSI
APIEFVREVR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtggattatctacagggacttaatgaaaaacaaaaggaaggggttcttcacacggaaggc
ccattgttaatattggcgggagccggttccgggaaaaccagagttatcactcataaaatt
gcttatctgattgaggaaaagagagtatttccgagcaatatcctggccataacctttacg
aataaagcagcaaaagagatgaaagaaagggtggagggtttgcttaaggggagagtggaa
gatatatggatgggaacttttcattccatgtgtgtaagaatattgaggagagaaattgaa
tcaattggttataaaagaaacttttccatatatgactctcttgatcaaaagactttagta
aaggaatgtataacagaaaaaaatttaaataaggaaacttttcaggaaaagcctataatt
aacattatcagttctctaaaggatgacatgattgatcccgatgactacataaatgaaaat
tataaggattattataggagaaatgtgggagaaatatatggcctttatgaggaaaaactt
aagaagaacaatgcattggattttgacgatttgatcttgaaaactgtttttcttcttaaa
tccgatgaaagaattcgtgagaaatatcaaagcaaatttgagtatatatttgttgatgaa
tatcaggatactaataaatcccaatatgaacttataaaatatctttcagggaagcacgga
aatatttgtgtcgttggagatgaagatcaatctgtatatggctggagaggtgccgatata
agaaatattttaaactttgaaagagatttcaaaggcgcggaagtaatcaaacttgaacaa
aattatcgttccacgggaaatattcttgatgttgccaattccatcattaagaacaatacg
gagagaaaaggcaaaaaactgtggactgccaaagaaagagggcaatatgctactcttaaa
attaatttcgatgaaaaggaagaagcaaattttgttactcaaaaggttattgatctgata
gaggaagggaaatataaatatggtgattttgttatactatataggactaatgctcaatcc
cgaagttttgaagaaacatttataagaaacaacataccttacaaaattgtaggaggatta
aagttttatgatagaaaggaagtaaaggatttaattgcttatttgaggcttattcaaaac
cctttagatgatatttctctcagaaggattataaatgtgcctaaaagagggataggggcg
tctacgctggggaaaatagaaaagtatacttctcaaaccggagaaagcatatatggtgct
ttacttgatttagataaaatacaaggattaagtgggagagcaagaaatgtcattaaatct
tttactgctatgataaacaaatttttggctatgaaggagataatgggagtaagagatttt
atagaagaagttgtatattcgacgggttatataaaagaattggaagaagaaaattctgtt
gaatcccaaagcagaatagaaaatttaaaagaatttatatctgtggcagtggattttgag
actaattatgaagggggaactttagaggactttcttgcaaatgtgtcattgctctccgac
gttgataagacggatgaaagaaaagacgtggtaaccatgatgaccgtccatggtgcaaaa
ggactggagtttccggtggtatttttagtcggaatggaagaagggctttttccgataagc
agagctttggatagtattcatgatatggaagaggaaagaaggctttgctatgtagcagtg
acaagagctgaagaacttttatatatttcctatgcaaacttaagaactatatatggaaat
acgacctacagcttgccttccaggttcttaaaagagattcccgatgatatgctaaaaata
tgcaagaatgatcagagaaaagaaaaacaggaagatgaaattgaatatgaggaaaggaca
gatattaaaaatagatttgaaaagaaagtgaatcttaaagaggacattcaaatcggaagt
aaggttaatcacaaaatgtggggaatgggtactgtagtgcagataaaaaaagtaggtgaa
gataaagaaatagttgttgcttttgaaaataagggattaaaaaaattgcttctttcaatt
gctcctatagagtttgtaagggaggttagataa
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