Acidilutibacter cellobiosedens: EQM13_07375
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Entry
EQM13_07375 CDS
T05805
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spoa
Acidilutibacter cellobiosedens
Pathway
spoa03410
Base excision repair
spoa03430
Mismatch repair
spoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EQM13_07375 (recJ)
03430 Mismatch repair
EQM13_07375 (recJ)
03440 Homologous recombination
EQM13_07375 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoa03400
]
EQM13_07375 (recJ)
DNA repair and recombination proteins [BR:
spoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EQM13_07375 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EQM13_07375 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EQM13_07375 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QAT61410
UniProt:
A0A410QBT5
LinkDB
All DBs
Position
1550267..1552759
Genome browser
AA seq
830 aa
AA seq
DB search
MIEFDRLYKIHQYDDKLINKISQELNIPKLIAKLLVNRGFANSSQCREFLDTDLNNMYDP
FMLKDINKGAERILEAINEKEKICIYGDYDVDGITSTSILLIFLKGIGGDCFYYIPNRLE
EGYGISKRAVDYISSQKASLIITVDCGITNIEEVEHLKQKNMDIIITDHHQCGDIIPKCS
AVINPNRSDDGYPFKKLAGVGVTFKLIQALSSVLNIPVDYEKILPLVAFGTVADIVSLTG
ENRIIVKNGLNMIKNTTNIGIKALIEVSGLKGRDIDSYHIGFVMGPRLNAAGRLGTARKG
VELFLSEDYDSALSIAKELSEENSKRQSIENDILKEAEKLIAEEIDLDSEKVIVLQSDKW
HSGVIGIVASKLLEKYYRPVILFAVEGDTARGSARSIPAFNIYEGLKSCEGLLEKYGGHK
MAAGISINKNNILKFRKGINKIADKVLSKEDLIKEIDIDCAISSQDIELETIEDIKKLEP
FGIDNPTPQFILKNGKIEDLRTVGKYRKHIKMSITKDGKKVNCIGFDLGEYANILNPKDE
INIVGFLGINEYMNILSPQIFIKDIVGNYEYRNKYYYYFKRKLNSGHKYNDENENNISIS
HSKENRFDYIFDILDKEKGVLILINNYFNLVRVSNRIQTQGRNFIRRICLNFECDEGEKE
NSVVFLPNLELIDKNRYNKIILYDFNFNKDELFKFLDDSNDYSVEFLGKEEDIELNKKVL
NYIVPSLEDMRIVYRNLFSAKSNFLMIETNPYVHSLSKKLSSGFTKPKLDLILDIFKDCN
LIDYIENNGNYNIKLLNRRKEKIDIMNIPKVRYLQKLYSQWTKNQEMTSR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaattcgataggctttataaaattcatcaatacgacgataaattaattaataaa
atttcacaagaattaaatattccgaagttgattgccaagctattggtaaacagaggtttt
gctaactcttctcaatgcagagaattccttgacaccgatttaaacaatatgtatgatccg
tttatgctgaaggatataaataaaggagcggaaaggatacttgaagcaattaatgaaaaa
gaaaagatatgtatatacggggattatgatgtagacggaattacaagtacatccatactt
ttaatttttctcaaaggtataggcggagattgtttttattatattccaaacaggcttgaa
gaagggtatgggatcagtaaaagagcggtggattatatctcttctcaaaaagcgtctttg
ataataacagttgattgtggaataactaatattgaagaagtggagcatctgaagcaaaag
aatatggatataataattaccgatcatcatcaatgcggcgatatcattccaaaatgcagt
gcggtaattaatccaaacaggtctgatgatggttatccctttaagaaactggcaggagta
ggggtgacattcaaactaatacaagctttatcttctgtattgaatattcctgtagattat
gaaaaaatacttccgttggtggctttcggaacagtagctgatatagtatctttaacagga
gaaaataggattatagttaaaaatgggctcaatatgataaaaaatacaactaatatagga
attaaagcattaatagaagtttcgggacttaagggaagagatattgattcttaccatatt
gggtttgttatgggaccgagattaaatgcagcgggaagattggggacagcgaggaaggga
gtggaacttttcctttctgaggattatgattcggcgttatctattgcaaaagaattaagc
gaagaaaattcaaagagacaaagtatagagaatgatatactaaaagaagccgaaaaatta
atagccgaagaaatagatttggattccgaaaaggtaatagtgctgcagtccgataaatgg
cattcgggagttatagggatagttgcttcgaagcttttggaaaaatactatagacctgtt
atattattcgcggtggaaggagatacggcaagaggctctgccagaagtattcctgctttc
aatatatatgagggtttaaaatcatgcgaaggccttttggagaaatatggcgggcataag
atggcggcgggtatttcaatcaataaaaataacattttaaaattcagaaagggaatcaat
aagattgctgataaggtattgagtaaggaggatttaattaaagaaatagatatagactgc
gcaatttcttctcaggatatagaattggaaactatagaggatataaagaagttggaaccc
ttcggtattgataatcctactcctcaattcatattgaaaaacggcaagatagaggattta
aggactgtaggcaaatatagaaagcatattaaaatgtccattacgaaagatgggaaaaaa
gtgaattgtataggatttgatttaggagagtatgctaatatattaaatcccaaagatgaa
ataaacattgtaggtttcctcggcataaacgaatatatgaatatattaagccctcagata
tttataaaggatatagtgggtaattatgaatataggaataaatattattattattttaaa
aggaaattaaatagcggacacaaatataatgatgaaaatgaaaataatataagtatttct
cacagtaaggagaacagatttgattatatctttgatatcttggataaagaaaagggagtt
cttatcttaataaataattattttaatttagtcagagtgtctaacagaattcaaacccag
ggaagaaatttcatcagaagaatttgtttgaactttgaatgtgatgaaggagagaaagaa
aattccgttgtttttctacccaatttagaattaattgataaaaatagatataataagatt
atattatatgattttaattttaataaggatgaattattcaaatttttagatgacagcaat
gattattctgttgaattcttgggaaaagaagaggatattgaattaaataaaaaagtatta
aattatatagttccttctttagaagatatgcgtatagtatatagaaatttattttctgca
aagagtaattttttaatgattgaaacaaatccctatgttcattctttgagcaaaaaatta
agttccggattcacaaaaccaaaacttgatttaatattggatatatttaaagattgtaat
ttaattgattatattgagaataacggtaattataatattaaacttttgaatagacgaaaa
gaaaagatagatataatgaatattcctaaggttagatatttacagaagttgtattctcaa
tggacaaaaaatcaagaaatgacgagtaggtga
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