Acidilutibacter cellobiosedens: EQM13_08565
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Entry
EQM13_08565 CDS
T05805
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
spoa
Acidilutibacter cellobiosedens
Pathway
spoa02020
Two-component system
spoa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EQM13_08565
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EQM13_08565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spoa03021
]
EQM13_08565
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spoa02035
]
EQM13_08565
Transcription machinery [BR:
spoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EQM13_08565
Bacterial motility proteins [BR:
spoa02035
]
Flagellar system
Flagellar assembly proteins
Stator
EQM13_08565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF2670
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QAT61633
UniProt:
A0A410QC79
LinkDB
All DBs
Position
1779705..1780463
Genome browser
AA seq
252 aa
AA seq
DB search
MTTKELWYKYKETNDMESKKELIEKYVPLVKVVAGRMFNFYGSKIEYDDLVGFGVLGLID
SIERFDLHKNIKFETYAQIRIKGAIIDNIRKLDWIPRSLRKKSKDVQKAIFELENKLGYN
PSNEQISEYLHISLKEVENMLSDITTFNVVSLEDFLNENGEYFFEVKEDDKDTPERVYEK
DEIKKILVDTIDALPEKEKLIISLYYYEELTYKEIGHILKLSESRISQIHSRVLIKIKNC
LIKSGINSNDLR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaaagaattatggtataaatataaagaaacaaatgatatggaatcaaaaaag
gaattgatagaaaaatatgttcccttagttaaagttgtagcgggaagaatgttcaacttt
tatggaagtaaaattgaatatgatgatctggtagggtttggagtgctgggacttatagac
agtattgagaggtttgatctgcataaaaatataaaattcgaaacctatgctcagatacga
ataaaaggtgcaattattgataatataagaaaacttgactggattccaagatctttgagg
aaaaagtcaaaagatgtacaaaaagccatttttgaattggagaacaaactgggatataat
ccttctaacgaacagatatccgagtatttgcatatttcactaaaagaagtggaaaatatg
ctgtcagatataactacatttaatgttgtatctttggaggactttttaaatgaaaacgga
gaatacttttttgaggtaaaagaagatgataaggatactcctgagagggtttatgaaaag
gacgaaataaaaaaaatactggttgataccatagatgctcttcctgagaaagaaaaactt
ataatttctttgtattattatgaagaattgacttataaagaaataggtcatattttgaag
ttatctgaatcaagaatatctcaaatacatagcagggtgttaataaaaataaaaaactgt
ttaattaagagtggaataaattcaaatgatttgaggtga
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