Acidilutibacter cellobiosedens: EQM13_08695
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Entry
EQM13_08695 CDS
T05805
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spoa
Acidilutibacter cellobiosedens
Pathway
spoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQM13_08695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spoa03019
]
EQM13_08695
03016 Transfer RNA biogenesis [BR:
spoa03016
]
EQM13_08695
Enzymes [BR:
spoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EQM13_08695
Messenger RNA biogenesis [BR:
spoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EQM13_08695
Transfer RNA biogenesis [BR:
spoa03016
]
Prokaryotic type
tRNA degradation factors
EQM13_08695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
EXOSC1
S1_2
Mug135_C
Motif
Other DBs
NCBI-ProteinID:
QAT61658
UniProt:
A0A410QCW0
LinkDB
All DBs
Position
1806567..1808681
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AA seq
704 aa
AA seq
DB search
MERTFEYELDKRKLTVNIGKVAEQANGSCLIRYGDTVLLVTACSSKEPREGVDFFPLSVD
YEEKLYSVGKIPGGFIKREGKPSEKAILTSRLIDRPIRPLFPKGYRNDVQVIATVLSVDQ
DCSPDIVAMIGSSVALSISDIPFQGPTGSVAVGLIDGKFILNPTSAEREKSDLSLIVSGT
KDAVMMVEAGANEVPEDLMLEGILFAHEYIKEICNFIESIQKEVGKEKQEYEVFKPDELI
EKEVKEYATDKLREAIHTVDKQGRDENIDKCKEEVMEYFLEKYPENEEDIDGSLYDIIKE
EVRSMILNDGIRPDNRKVDEIRPITCEVGILPRTHGSGLFTRGQTQVLTITTLGASEDVQ
IIDGLGKEESKRYMHHYNFPPYSTGETRVMRGPGRREIGHGALAERALEPVIPSEENFPY
TIRLVSEVLSSNGSTSQASVCGSTLSLLDAGVPIKAPVAGVAMGLMKSEDKVVILTDIQG
MEDFLGDMDFKVAGTEKGITAIQMDIKIAGIGRNILKEALERARIGRLFILNKMREAISS
PRKELSPYAPRIFSMNVNPDKIRDIIGPGGKVINKIIDETGVKIDIDESGKVVIAAENIE
NGKKAVNLIEKIIKDVEVGEIYLGKVTRIVNFGAFVEILNGKEGLVHISNIARERINKVE
DVLSVGDEILVKVMEIDNQGRINLSRKAALPPEDKESEKSNDKK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaacttttgaatatgagcttgataaaaggaaactaacagtgaacattggcaaa
gttgcagagcaagctaacggatcatgtttgattcgctacggtgatacggttttgctggtg
acggcatgttcttcaaaagagccaagggaaggggtagatttcttcccattaagtgtagac
tatgaagaaaagttgtattcagtagggaaaatacccggaggatttatcaaaagagaaggt
aaaccgagtgaaaaggcaatacttacttcgaggcttatcgatagacctataagaccactt
tttcctaagggatatagaaatgatgttcaggtgattgctacggtgttaagtgttgatcag
gattgcagtcctgatattgttgctatgatagggtcttccgtagcgttaagtatttcagat
ataccttttcaaggacctaccggttcggtagctgtaggattaattgacggaaaatttata
ttgaatcctacaagtgctgaaagagaaaagtcagatctcagtttaattgtatcaggtacc
aaagatgcggttatgatggtagaagcgggagccaatgaggtgcccgaagatttgatgctg
gaaggaattctttttgctcatgaatatatcaaagaaatctgtaatttcattgaatcaatt
caaaaagaagttggaaaggaaaagcaagaatatgaagtattcaaacccgatgagttaatt
gaaaaagaagtaaaagaatatgcaacagacaaacttagagaagcaattcacacagtggat
aagcaaggaagagatgaaaatatcgataaatgtaaagaagaagtgatggaatatttttta
gaaaaatatcctgaaaatgaagaggatatagacggttccttgtatgatattataaaagaa
gaagtaaggagcatgattttaaacgacggtatcagaccggacaacagaaaagttgatgaa
ataaggcctattacatgtgaagtgggaatacttccgagaactcatggttcaggattattt
acgagaggccaaactcaggttcttactataacaacccttggagcttctgaggatgttcag
ataatcgacggtctcggaaaagaagaatcaaaacgatatatgcatcactataattttcct
ccttatagtacaggagagacaagagtgatgagagggcccggaaggagagaaataggccac
ggtgcattggcagaaagggcattagagccggtaataccttcagaagagaattttccttat
accatcagacttgtttccgaagtattaagttccaatggttctacatctcaggcaagtgtg
tgtggaagcacattatcactattggatgccggggttcccattaaagctcctgtagcaggt
gtagcaatggggttgatgaagtcagaagataaagtagttatattgacggatatccaagga
atggaagattttcttggtgatatggattttaaagtagcaggaaccgaaaaaggaattacg
gctattcaaatggatataaagatagcaggaataggcaggaatattcttaaagaggcactg
gagagagcaagaataggaagattatttatactcaataagatgagagaagcaataagttct
ccgaggaaagaattatctccttatgctcccagaatattttctatgaatgtaaatccggat
aagataagggatattattggtccggggggaaaggtgataaataagataattgatgaaaca
ggagtaaaaatagatatagacgaaagcgggaaagttgtaattgctgctgaaaatatagaa
aatgggaagaaagcagttaatttaattgagaaaataataaaggatgtagaagttggagaa
atatatctggggaaggtcacaagaatagtaaatttcggagcttttgtagaaatacttaac
gggaaggaaggattggttcatatatcgaatatagcaagagaaaggataaacaaggtagaa
gatgtactgtccgttggtgatgaaatacttgtaaaagttatggaaatagataatcaaggt
agaattaatttatcgagaaaagcggctcttcctccggaagataaagaaagcgaaaaatcg
aacgataaaaagtaa
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