Acidilutibacter cellobiosedens: EQM13_11905
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Entry
EQM13_11905 CDS
T05805
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spoa
Acidilutibacter cellobiosedens
Pathway
spoa03030
DNA replication
spoa03410
Base excision repair
spoa03420
Nucleotide excision repair
spoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EQM13_11905 (polA)
03410 Base excision repair
EQM13_11905 (polA)
03420 Nucleotide excision repair
EQM13_11905 (polA)
03440 Homologous recombination
EQM13_11905 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spoa03032
]
EQM13_11905 (polA)
03400 DNA repair and recombination proteins [BR:
spoa03400
]
EQM13_11905 (polA)
Enzymes [BR:
spoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EQM13_11905 (polA)
DNA replication proteins [BR:
spoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EQM13_11905 (polA)
DNA repair and recombination proteins [BR:
spoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EQM13_11905 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EQM13_11905 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
Imm72
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QAT63458
UniProt:
A0A410QHL4
LinkDB
All DBs
Position
complement(2461999..2464662)
Genome browser
AA seq
887 aa
AA seq
DB search
MIIDGSSLLYRAFYALPLLSTKDGIYTNGVYGFLTMFYKIKDEYDLDYICIAFDKKGPTF
RHIEFDKYKANRQQMPNELSIQFPILKEVLKAMNVTFIETDGYEADDIAGTVCNIGKENN
MEVILVSGDKDYLQLVSPHSKVLLVRKGITQLEEYDEKKMEERYGITSQQFIDLKGLMGD
QSDNIPGVPGIGEKTGIKLIKQFGSIENIFEHIDEVSGNKVKNSLIEYKQGAFMSRKLSE
IITNVPLDIELEDLKVRKADFKQLKEIYEKLEFKSLINKIPEDEIEHNNKNIYRSEYFIG
GKDNINTILKGIDKEKKFSFKFVFEDSDYIKDEILGVALKCNDFPSLYLDFLGEPSLIDE
FKHNFKEYFERDDIEKIGHDLKGDILGLFRMGIDIKNITFDSAIAQYLINPSQTDYSIGK
LSEKYLNVNIEDKEKILGKGKNKRTFKDLSVSERAEYFSNILNMVYSLENTMEGFIESFG
MTELYNNVELPLIEVLASMEWYGFKVDENILKSLGEEFEEEIEKLTHKIFDLAGEEFNIN
SPKQLGEILFEKLNLPVIKKTKTGYSTDAEVLGKLKDKHSIVDNILKYRQLVKLKSTYID
GFIALIDKNTGRVHSSFNQTVTNTGRISSTEPNLQNIPVKTEEGKRIRKAFVPENNDYLL
VDGDYSQIELRVLAHISDDPKLKESFFHDEDIHTRTASEVFKVKKEDVTPAMRGRAKAVN
FGIIYGISDYGLSRNLNISRKEAKEYIKNYLENYSMVESYMDDIVKRGRETGYVETILHR
RRYIPELNSKNFNVRSFGERIAMNTPIQGSAADIIKVAMVNVYYELKKRKLKSRLILQIH
DELIVEAEKEEKDEVMKLLKDIMEKSTVLNVPLKADVKVGESWYETK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgataattgatggaagcagccttttatatagggctttttatgcgctgcctcttttgtct
acaaaagatggaatatatactaatggggtatatggatttttgactatgttttataagata
aaggatgaatatgacctggattatatatgtatagcttttgacaagaaagggccaactttc
aggcatatagaatttgataaatataaggcaaataggcagcagatgcctaatgaattgtct
atacagttccccatactcaaagaagtgttaaaagcaatgaatgttacctttattgaaaca
gatggatatgaagctgatgacattgcaggcactgtatgcaatataggaaaagaaaacaat
atggaagttatattggtgtcaggggataaggattatcttcagcttgtttctcctcattcc
aaagttcttttagtcagaaagggaataactcaattagaagaatatgacgagaaaaaaatg
gaagaacgatatggaattacttcccaacaatttatagatttaaaaggccttatgggagat
cagtccgataatattccgggggttcccggaattggagaaaaaacgggaattaaacttata
aagcagttcggctccattgaaaatatttttgaacatatagatgaggtttccggaaataaa
gttaaaaattctttaatagaatataaacaaggagcatttatgagcagaaaattatctgaa
ataatcacaaatgttccgctggatattgaattggaagatttgaaagtcagaaaagctgat
ttcaaacaattaaaagaaatttatgagaaattggaattcaaaagcttaattaataagatt
ccggaagatgaaattgaacacaataataagaatatctatagatcggaatactttatagga
ggaaaagataatattaatacaatcttaaagggaatagataaggaaaagaaattttctttt
aaatttgtatttgaggattcggattatataaaagatgagatattaggagttgccttaaaa
tgtaatgattttccttcattatatttggattttttgggagaaccttctttaatagatgaa
tttaagcataattttaaagaatattttgagagagatgatatagaaaaaataggtcatgac
ttaaagggggatatcttaggattatttaggatgggaatagatattaaaaatattacattt
gatagtgccattgcgcaatatttaattaatccttctcaaacggattatagtattggaaaa
ttatctgaaaaatatttgaatgtaaatattgaagataaagaaaaaatattggggaaaggg
aaaaacaagaggacttttaaagatttatccgtatcggagagagcagaatatttttcaaac
atacttaatatggtttattccttagaaaatactatggagggatttattgaaagctttggt
atgactgaactttataacaatgtagaattgccccttatagaggtattggccagcatggaa
tggtatggatttaaagtagacgaaaatatacttaaaagtcttggagaggaatttgaagaa
gaaatagaaaaattgacacataaaatatttgatttagcaggagaagaatttaatataaat
tcaccaaagcaattgggagaaatattatttgaaaaactgaatcttcctgttattaaaaag
acaaaaaccggatattctacagatgcggaagtgctgggaaaattaaaggataaacattcc
atagttgataatatccttaaatatagacagttagtcaaattaaaatctacctatattgac
ggatttattgctttaattgataagaatactggcagagttcattccagttttaatcaaaca
gttacgaatacaggaagaataagcagtaccgagccaaatctccagaatatacctgtaaaa
actgaagagggaaagagaatacgaaaggcttttgttccagaaaataatgattatctgtta
gttgatggagattattctcaaatagagctgagagtgttggctcatatctccgatgatcca
aaattaaaggaatcattttttcatgatgaagacattcatacaaggaccgcaagcgaagtt
tttaaagtaaaaaaagaagatgtaacacctgccatgagaggaagagctaaggcagttaat
tttggaataatatatggtataagtgattatggtctttcaagaaatttaaatatatctcga
aaagaagcaaaggaatatatcaaaaattatcttgaaaattatagtatggtagaaagctat
atggatgatatagtgaaaagaggcagggaaacggggtatgttgaaactatacttcataga
agaagatatatccccgaattgaattccaaaaattttaatgtaaggagttttggagaaaga
attgctatgaatacccctattcagggaagtgccgcagatataataaaagtggcgatggtt
aatgtctattatgaacttaagaagagaaaattaaaatcaagattgatacttcagatccat
gatgaattgatagtagaagcagagaaagaagaaaaggatgaagtgatgaaattgctaaag
gatataatggaaaaatctactgttctaaatgttcctttaaaagctgatgtaaaagtaggt
gaaagttggtatgaaacaaaatag
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