Acidilutibacter cellobiosedens: EQM13_14265
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Entry
EQM13_14265 CDS
T05805
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spoa
Acidilutibacter cellobiosedens
Pathway
spoa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spoa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EQM13_14265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spoa03021
]
EQM13_14265
03400 DNA repair and recombination proteins [BR:
spoa03400
]
EQM13_14265
Enzymes [BR:
spoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EQM13_14265
Transcription machinery [BR:
spoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EQM13_14265
DNA repair and recombination proteins [BR:
spoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EQM13_14265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QAT62645
UniProt:
A0A410QFE4
LinkDB
All DBs
Position
complement(2968957..2969904)
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AA seq
315 aa
AA seq
DB search
MLEIEKPKIEIVEMSEDNTYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAISSIKIQG
VLHEFTTIPGVLEDVPEIILNIKGIAAKMYSDEPVMLKIEVEGPKEVTAGDIITGPDVEI
VNKDLHIATVNQDGKLYVELEMIKGRGYTVAEKNKKEGQPIGVIPIDSIFTPISKVNYKV
ENTRVGQITDYDKLTLEVWTNGTMKPDEATSLGAKILTEHLNLFIGLTEHVNDVEIMVEK
EEDKKEKVLEMTVEELDLSVRSYNCLKRAGINTVEELTQKSEEDMMKVRNLGKKSLEEVQ
RKLSELGLALRKNDD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaattgaaaaacctaaaattgaaatagttgaaatgagtgaagacaatacctat
ggaaaatttgttgtggaacctttggaaagaggatacggtacgacattggggaattctttg
aggagggtattgctttcctcgttacctggtgctgccatatcttctataaaaattcaagga
gttttacacgagtttactactattccgggagtgttggaagatgtccctgaaattatactt
aatataaagggcattgcggcgaagatgtattccgatgaaccggttatgttgaaaattgaa
gttgaagggcctaaggaagttaccgcaggagatataattacaggtcctgatgttgaaata
gtaaataaggatctccatattgctacggtaaatcaagacggaaaattatatgtggaattg
gaaatgattaaaggaagaggatatacagtagcggaaaaaaataaaaaggaagggcagcct
ataggtgttattcccatagattcaatttttactccgattagtaaagtgaattataaagtt
gaaaatacgagagtaggtcaaattacggattatgataagttgacattagaagtatggact
aatggtaccatgaagccggatgaagcaacttctttgggagctaaaatacttactgaacat
ttaaatctatttattggccttaccgagcatgtaaatgacgtggaaataatggtagaaaaa
gaagaagataaaaaagaaaaagttttggaaatgacggttgaagaattggatttatctgtt
agaagttataattgcctaaagagagcaggaataaataccgtggaagaattaactcagaaa
agtgaagaagatatgatgaaggttagaaacttaggcaagaaatcccttgaagaagtgcaa
aggaaattatccgaattgggtttagccctcagaaagaatgatgattaa
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