KEGG   Acidilutibacter cellobiosedens: EQM13_14920
Entry
EQM13_14920       CDS       T05805                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
spoa  Acidilutibacter cellobiosedens
Brite
KEGG Orthology (KO) [BR:spoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spoa03032]
    EQM13_14920
   03036 Chromosome and associated proteins [BR:spoa03036]
    EQM13_14920
   03400 DNA repair and recombination proteins [BR:spoa03400]
    EQM13_14920
DNA replication proteins [BR:spoa03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    EQM13_14920
Chromosome and associated proteins [BR:spoa03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    EQM13_14920
DNA repair and recombination proteins [BR:spoa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      EQM13_14920
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-DNA_bdg Peptidase_C80 DUF2267 Rapsyn_N VWA_3
Other DBs
NCBI-ProteinID: QAT62764
UniProt: A0A410QG08
LinkDB
Position
complement(3094907..3095185)
AA seq 92 aa
MNKAELVSSIAEKSNLTKKDTENALNAFMKVVEEALAKGDKVQLVGFGTFEVRERKAREG
RNPRNPEEVIQIPASKAPVFKAGKALKEIVNK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaagctgaattagtttccagcatagctgaaaaaagtaatttgacaaagaaggac
acagagaatgctttaaatgcatttatgaaggtagtggaggaagctctggcaaaaggagat
aaggttcaattagttggttttggaacttttgaagtaagagaaagaaaagccagagaagga
aggaatccaaggaatcctgaagaagttattcaaattccagcctcaaaagctccagtgttt
aaagctggcaaggcattaaaagaaatagtgaataagtaa

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