Acidilutibacter cellobiosedens: EQM13_17555
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Entry
EQM13_17555 CDS
T05805
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spoa
Acidilutibacter cellobiosedens
Pathway
spoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQM13_17555 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spoa03019
]
EQM13_17555 (recQ)
03400 DNA repair and recombination proteins [BR:
spoa03400
]
EQM13_17555 (recQ)
Enzymes [BR:
spoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EQM13_17555 (recQ)
Messenger RNA biogenesis [BR:
spoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EQM13_17555 (recQ)
DNA repair and recombination proteins [BR:
spoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EQM13_17555 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HTH_40
HRDC
RecQ_Zn_bind
Cas3-like_C_2
HTH_24
ResIII
Helicase_Sgs1
HTH_36
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QAT63240
UniProt:
A0A410QGW7
LinkDB
All DBs
Position
complement(3635959..3638118)
Genome browser
AA seq
719 aa
AA seq
DB search
MDIYDVLKTYFGYDKFKKGQERLIGGILKGKDVLGIMPTGGGKSLCYQLPAVILQGVTIV
ISPLISLMKDQVDSLNEMGIKATFINSSLDHKEFIERLYDVKAGKYKILYIAPERLNTKI
FINLVESIDISFIAVDEAHCISQWGHDFRPSYLQIPQFIKSLKYRPPVGAFTATATKEIV
KEIKELIGLRNPIESITGFDRPNLFYQVIKVNDKFSYVLNYLENNYEEDSGIIYCATRKT
VESLFKKLTEKGFSVVQYHGGMNSEDRQENQDSFIFNRSRIIIATNAFGMGIDKPDVRFV
IHYNMPKNMEAYYQEAGRAGRDGQKSDCILLYSPGDIVKQKFIIQNSNFSSERETVMYEN
LQYLIDYCNTDDCLRNFILSYFGETPGKKKCNNCGNCLDKSEMIDVTIEAQKILSCVYRT
HERFGLSTIIQVLRGSKSKRILEFGLDKVSTYGIMADYNEGAVREIAMTLTSKGYIEVTA
DKFPILKLTARSKEILTGEVKVYHKRYLIEKKIEIEKSVKKTGIEKFDENLFIKLKELRY
KISQKKNLPPFMIFHDSTLQEMASYFPKNKEELLAISGVGIKKYESYGEDFILLIKSYCE
ENEIDLKSLKVTISTGDEKHDRYKITYDCYLQGLSLEEIAKRRNFTVNTIIEHLKKCEKD
GLKVDWSRFIDDFHKEKRILEAIGKLGLKRLKPIKESLPKDITYEDIKIIMAKNQLKIQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggatatttatgatgtgctgaaaacttattttggatatgataaattcaaaaaagggcaa
gaaaggctaattggaggaatacttaaaggaaaagatgttctggggataatgccgacagga
gggggaaaatctctatgctatcagttgccggcagttattcttcagggagttactatagtg
atttctcctttaatatccttaatgaaagatcaggtggattccctaaatgagatgggaata
aaggctacatttattaatagttctcttgatcataaagaatttattgagagattatacgat
gtaaaggcaggaaaatataaaatattatatattgctccggagcgtttgaatacaaaaatt
tttattaacttagttgaaagcatagatatttctttcattgcagtagatgaagctcattgt
ataagtcagtggggacatgatttcagaccaagttatcttcaaattcctcaattcataaaa
tcattgaaataccgacctcctgttggagcttttacggctacggctacaaaagaaatagtc
aaagagataaaagaattaataggattaaggaatcctatagaatccataacgggatttgac
agacctaatttgttttatcaggtaattaaagttaatgataagttttcctatgttttaaat
tatttagagaacaactatgaagaagactcgggaataatatattgtgctaccagaaaaacc
gtagagtccttgtttaaaaaacttacagaaaaaggattttctgttgtacagtatcatggg
ggaatgaattcggaagataggcaggaaaatcaggatagttttatatttaacagatctcgg
ataataattgcgacaaatgcttttggaatgggaatagataaaccggatgtgaggtttgta
attcattataatatgcctaaaaatatggaagcatattatcaggaagccggcagagcagga
agagatggacaaaaaagtgattgtatacttctttattctcccggggatattgttaaacaa
aaatttattattcaaaatagcaatttttcttcggagagagaaactgtgatgtatgaaaat
cttcaatatcttatagattattgcaatactgatgattgtttgagaaattttatattatct
tatttcggagaaactccgggaaagaaaaagtgtaacaattgtggcaattgtttggacaag
tccgagatgattgatgtaaccatagaagctcaaaagattttatcgtgtgtatatagaacc
catgaaaggtttgggttaagtactataatacaagtattaagaggttcaaaaagtaagaga
atattggagtttggtcttgataaagtatctacctatggaataatggcagattataatgaa
ggggcagttagagaaattgctatgacattaacgtctaaaggatacatagaagttaccgca
gataaatttcctatattgaaattgacagcaagatcaaaggaaatcttaacaggtgaggtt
aaagtttatcataaaaggtatttaatagagaaaaagatagaaatagaaaaatccgtgaaa
aaaacaggtatagaaaaatttgatgagaatttatttataaaattaaaggaattaagatac
aaaatatctcaaaagaaaaatctacctccctttatgatatttcacgattccactttgcaa
gagatggcttcctattttcccaaaaataaagaagaacttttggcaataagcggagtcgga
attaaaaaatatgaaagttacggggaagattttatattattaattaaaagttattgcgag
gaaaatgagattgacttaaaatcattaaaggttacgatatctacgggagatgaaaaacac
gacagatataagattacatatgattgttatctacaaggcctttctttagaagaaattgca
aaaaggagaaattttacggttaatactataatcgagcatcttaaaaaatgtgaaaaagat
ggattaaaagtagattggtcaagatttattgatgatttccataaggaaaaaagaatatta
gaggctatcggaaaattgggattaaaaagattaaaaccgattaaagagtctttaccgaaa
gatattacctatgaagatattaaaatcataatggcgaagaatcagctgaaaatacaataa
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