Streptococcus porcinus: NCTC10925_00063
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Entry
NCTC10925_00063 CDS
T07290
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spoc
Streptococcus porcinus
Pathway
spoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC10925_00063 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoc03400
]
NCTC10925_00063 (ruvB)
Enzymes [BR:
spoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10925_00063 (ruvB)
DNA repair and recombination proteins [BR:
spoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10925_00063 (ruvB)
RecFOR pathway proteins
NCTC10925_00063 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_14
Mg_chelatase
AAA_3
nSTAND3
AAA_16
Sigma54_activat
Rad17
RNA_helicase
ResIII
DUF815
NTPase_1
NB-ARC
AAA_18
TsaE
IstB_IS21
bpMoxR
AAA_24
AAA_17
Motif
Other DBs
NCBI-ProteinID:
VTT42079
LinkDB
All DBs
Position
1:44846..45817
Genome browser
AA seq
323 aa
AA seq
DB search
MGDEELVERTLRPQFLREYIGQDKVKDQLNIFIEAAKMRDESLDHVLLFGPPGLGKTTMA
FVIANELGVNLKQTSGPAIEKSGDLVAILNDLEPGDVLFIDEIHRIPMAVEEVLYSAMED
FYIDIMIGAGDTSRSVHLELPPFTLIGATTRAGMLSNPLRARFGITGHMEYYQVDDLTEI
IERTSDIFDMEIVQEAAHELARRSRGTPRIANRLLKRVRDYAQIMGNGIITKDITDKALE
MLDVDHEGLDYVDQKILRTMIEMYNGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFIV
RTRTGRVATQKAYQHLHYPYNEK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgaggagcttgttgaacgtactttgcgcccacaatttttaagagaatatatt
ggacaagataaggtaaaggatcagcttaatatttttattgaagctgcaaagatgcgggat
gagtctttagatcatgttctactttttggtcctccaggcttaggaaaaacgactatggca
tttgttattgcaaatgagctcggtgttaaccttaagcaaacttcggggccagctattgaa
aaatctggtgatttggtagctattttgaatgatttagaaccgggggatgttctgtttatt
gatgagatacatcgaattccgatggctgttgaagaggtactttatagtgccatggaagat
ttttatattgatattatgattggtgctggagatactagccgaagtgtccatctagaatta
ccgccgtttactttgattggggcaactacacgtgccggaatgttgtcaaatccattaaga
gcacgctttggtattactggccatatggaatattatcaagttgatgatttgactgaaatt
atagaacggacctcggatatttttgatatggaaattgttcaagaagctgctcatgagctt
gctcgacgtagtcgaggtaccccccgtattgctaatagacttttgaaacgtgttcgagat
tatgcacaaattatgggaaatggaatcattactaaagatattactgataaggctctagaa
atgttggatgttgatcacgaaggattagattatgttgatcaaaaaattctacgtaccatg
attgagatgtataatggtgggccagttggattgggaactttgtctgttaatattgctgaa
gaacgggatacagtagaggatatgtacgagccctatctcattcaaaaaggtttcattgtg
cggacacgtacggggcgagtagcaacacaaaaagcctatcaacatctacattatccttac
aacgaaaaatag
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