KEGG   Streptococcus porcinus: NCTC10925_00097
Entry
NCTC10925_00097   CDS       T07290                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
spoc  Streptococcus porcinus
Pathway
spoc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:spoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NCTC10925_00097 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spoc03021]
    NCTC10925_00097 (rpoA)
   03400 DNA repair and recombination proteins [BR:spoc03400]
    NCTC10925_00097 (rpoA)
Enzymes [BR:spoc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NCTC10925_00097 (rpoA)
Transcription machinery [BR:spoc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NCTC10925_00097 (rpoA)
DNA repair and recombination proteins [BR:spoc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NCTC10925_00097 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L SusF_SusE Mg_chelatase_C
Other DBs
NCBI-ProteinID: VTT42180
LinkDB
Position
1:67989..68927
AA seq 312 aa
MIEFEKPTITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTIPGVREDVMQIILNVKGLAVKSYVEDEKMIELDVEGPAEVTAGDILTDSDIELVN
PDHYLFTIAEGHSLKATMTVAKKRGYVPAEGNKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKATDVMKETEK
VNDEKVLDRTIEELDLSVRSYNCLKRAGINTVFDLTEKSEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaacaataacaaaaattgatgaaaataaagattacggcaga
tttgtcatcgaaccactagaacgtggttacggaacaactctcggtaattcacttcgtcgt
gtactcttgtcttccttaccaggtgcggcagttacatcaatcaaaattgatggggtatta
cacgaatttgatacaatcccaggtgtacgtgaagatgttatgcaaattatccttaatgta
aaagggcttgcagtaaaatcttacgtagaagacgaaaagatgatcgaacttgatgttgaa
ggtcctgcagaagtaactgctggcgacattttaacagatagcgacattgaacttgttaac
ccagatcattatctctttactatcgctgaaggtcattcactaaaagcaactatgactgtt
gctaaaaagcgtggatatgtccctgcagaaggtaataaaaaagatgatgcacctgtagga
acattggctgttgattctatctacacgccggttaaaaaagttaattatcaagttgagcct
gcccgtgttggtagtaatgatggctttgataaattaacaattgaaatcatgacaaatgga
acaatcattcctgaagatgcattaggtctgtctgctcgagttttaattgaacacttgaac
ctctttacagatttaacagaagttgcaaaagcaacggatgttatgaaagaaactgaaaaa
gtgaacgatgaaaaagtacttgaccgaacaattgaggagcttgatttgtccgtacgctca
tataactgtctaaaacgtgcaggaattaacactgtatttgatttaacagaaaaatctgag
cctgaaatgatgaaagttcgcaaccttggacgtaaaagtcttgaagaagttaaggttaaa
cttgctgatttaggtttgggactaaaaaacgataaataa

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