Streptococcus porcinus: NCTC10925_00587
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Entry
NCTC10925_00587 CDS
T07290
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spoc
Streptococcus porcinus
Pathway
spoc03030
DNA replication
spoc03430
Mismatch repair
spoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10925_00587 (holA)
03430 Mismatch repair
NCTC10925_00587 (holA)
03440 Homologous recombination
NCTC10925_00587 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spoc03032
]
NCTC10925_00587 (holA)
03400 DNA repair and recombination proteins [BR:
spoc03400
]
NCTC10925_00587 (holA)
Enzymes [BR:
spoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10925_00587 (holA)
DNA replication proteins [BR:
spoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10925_00587 (holA)
DNA repair and recombination proteins [BR:
spoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10925_00587 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
VTT43977
LinkDB
All DBs
Position
1:571030..572061
Genome browser
AA seq
343 aa
AA seq
DB search
MIAIEKVKKLSKDKLGLVTLVTGDDLGQFSQIKEEVLKIIAYDKDDLTYSYFDLSEGGYS
EAEMDLLSLPFFADTKFVIFDYFVDITTQKKNYLKENELKSFESYLENPLGTTKLIIFAP
GKLDGKRRIVKLLKRDAEVIEALPLKEEELKQYFQSRGKEIGLIFDSGVFDKLLLKSNGD
FSEMAKNLLFLKTYKGQGNISLEDVDEAIPKTLHDNIFDLSRFILQGSSDQVAELVHDLR
LAGEDEIKLIAILIGQFRLYLQIKLLVQDGKNEQQIVVALSDLMARRVNPYQVKFAIRDS
QNLSTAYLERVVKVLIETDYQIKKGVNDKSYLFDLALLKLMIG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaattgaaaaagtaaagaaattgtcaaaagataaactaggtcttgtaaccttg
gttacaggtgatgatttaggtcaattcagccagattaaagaggaagtcttgaaaataatt
gcttatgataaagatgacttaacctactcctattttgatttgtcagaaggaggatattct
gaagcagaaatggatttactaagtcttccctttttcgctgataccaaatttgttatcttt
gattattttgttgatattacgacacaaaaaaagaattacctgaaggaaaatgagctcaaa
tctttcgaaagctatttggagaaccctctaggaacgacaaagttaatcatctttgcgcct
gggaagctagatggaaagagacgtatcgttaagttattaaagcgcgatgccgaggttatt
gaagcacttcctttaaaagaagaagaattaaagcaatattttcagtcaaggggaaaagaa
attgggctgatatttgatagtggtgtttttgataagcttcttttaaaatccaatggtgac
tttagcgagatggcaaaaaatttattgtttttaaaaacatataagggacaaggtaatatc
tctttagaagacgttgatgaggcaattccaaaaacacttcatgataatatctttgattta
tctcgttttattttgcaaggaagtagtgatcaagtagctgaattggttcatgatctcaga
ctggctggtgaagatgaaatcaaattaattgctattttgataggacaatttcgattatat
ttacaaattaagttgttagtgcaagatggtaagaatgagcaacaaatagtcgtggctctt
tctgatttgatggcacggagagttaacccctatcaagtaaaattcgctattcgtgattca
caaaatttaagtactgcttatttagaaagagtagtgaaagtattgattgaaactgattat
caaattaaaaagggagtcaatgataaatcctatttatttgatttagccctccttaaattg
atgattggttga
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