Streptococcus porcinus: NCTC10925_00613
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Entry
NCTC10925_00613 CDS
T07290
Symbol
dnaH
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spoc
Streptococcus porcinus
Pathway
spoc03030
DNA replication
spoc03430
Mismatch repair
spoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10925_00613 (dnaH)
03430 Mismatch repair
NCTC10925_00613 (dnaH)
03440 Homologous recombination
NCTC10925_00613 (dnaH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spoc03032
]
NCTC10925_00613 (dnaH)
03400 DNA repair and recombination proteins [BR:
spoc03400
]
NCTC10925_00613 (dnaH)
Enzymes [BR:
spoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10925_00613 (dnaH)
DNA replication proteins [BR:
spoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10925_00613 (dnaH)
DNA repair and recombination proteins [BR:
spoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10925_00613 (dnaH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
DNA_pol3_gamma3
AAA_30
TIP49
AAA_assoc_2
AAA_14
AAA_16
AAA_2
AAA_24
AAA_19
AAA_7
CC_CDK5RAP2
Chalcone_2
DnaX_C
Mg_chelatase
AAA_18
Glyco_tranf_2_5
Rad17
Motif
Other DBs
NCBI-ProteinID:
VTT44075
LinkDB
All DBs
Position
1:600156..601838
Genome browser
AA seq
560 aa
AA seq
DB search
MYQALYRKYRSQTFAEMVGQKVVSTTLKQAVSSGKISHAYLFSGPRGTGKTSAAKIFAKA
MNCPNQVDGEPCNHCDICRDITNGSLEDVIEIDAASNNGVDEIREIRDKSTYAPSRATYK
VYIIDEVHMLSSGAFNALLKTLEEPSQNVVFILATTELHKIPATILSRVQRFEFKSIKQN
DISSHLAWILETEEIPYQEGALDLIARRAEGGMRDALSILDQALSLSSENQVDLAIAEEI
TGSISLAALDTYVFNLRHHDAQAALSDLATIFDNGKSMSRFATDLLTYLRDLLVVKVGGQ
SYSQSEYFQENLQIETDSIFAMIATITKYLPEIKKGSHPKIYAEMMTIALSKPTASATVG
MSEEVLTDLENLRSEVALLKESLESLESQASQTQGNTAVASKVNYSRKTFTYKVDRQKIL
TIMEETVQEREKSRQYLDSLKSVWNEILDSISPQDRALLLGSEPVLANSENAILAFEAAF
NAEQAMNRQDLNDIFGNIMSKAAGFSPNILAVPRADFNHIRSEFAKQMKAQSQEPVEEKK
SNEIPEEFGFLKDKIKTTED
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaagctttatatcgaaaatatcggagtcaaacctttgctgagatggttggacaa
aaggtggtttcgacaactttaaaacaagctgtttcatcaggcaaaattagccatgcttat
ttattttctggaccccgcggaacgggtaaaacgagtgccgctaaaattttcgcaaaagca
atgaactgcccaaatcaagttgatggggaaccttgcaatcactgtgatatctgccgtgat
attaccaatggtagtttagaggatgtgattgagattgatgcagcttcaaataatggagtt
gatgagattcgtgagattcgtgataaatcaacttacgcccctagtcgagcgacttataag
gtttacattatagatgaagttcatatgttgtcgagtggcgctttcaatgctctattaaag
actttggaagaacccagccaaaatgttgtctttatcttagctacaacagagcttcataaa
attcctgctacgattctttcaagagttcaacgatttgaattcaagtctatcaaacagaat
gacattagtagtcatcttgcctggattttagaaacagaagaaattccttatcaagagggt
gccttagatttgattgcccgaagggcagaaggcggtatgagagatgccttatcgatactg
gatcaggcattaagtttatcatctgaaaaccaagttgatttagctattgctgaagaaata
acggggtcaattagtttggccgctctagacacctatgtgttcaacctccgtcatcacgac
gcccaagcagcgctatcagatctagctaccatttttgataacggcaaaagcatgagtcgg
tttgctacggacttactcacttatttgagagatttattggtggtaaaagtaggtggtcag
tcctattcacaatctgagtactttcaggagaatttgcagattgaaacagactctattttt
gctatgattgcaacgattaccaagtatttaccggaaattaaaaaaggcagtcatcctaaa
atttatgctgaaatgatgaccatcgccttgtctaaaccgactgcttcagctactgtagga
atgtcagaagaagtactgactgatttggaaaatttgcgatctgaagtggctttattaaaa
gagagtttagaatctttagaatcacaggcttcgcaaacgcaagggaatacagctgttgct
agtaaagttaattattctcggaaaacctttacctataaagtagatcgtcagaaaattttg
actatcatggaggaaactgttcaagagcgtgaaaaatcacgacaatatctagactcttta
aaatcagtgtggaatgaaattttggatagtatttctccccaagatagagctttactttta
ggctcagagccagtcctagccaatagtgaaaatgctattttagcctttgaagcagctttc
aatgcggagcaagctatgaaccgtcaagatttaaatgatatatttgggaatattatgagt
aaggctgctggtttttcgccaaatatccttgcagtaccgagggctgattttaatcacatt
agatcggagtttgctaagcaaatgaaggctcaatcacaggagccggtagaagaaaaaaaa
tccaatgagattccagaagagttcggtttcttaaaggataaaataaaaacaacagaggat
taa
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