Streptococcus porcinus: NCTC10925_00635
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Entry
NCTC10925_00635 CDS
T07290
Symbol
rlmCD_2
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spoc
Streptococcus porcinus
Brite
KEGG Orthology (KO) [BR:
spoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spoc03009
]
NCTC10925_00635 (rlmCD_2)
Enzymes [BR:
spoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NCTC10925_00635 (rlmCD_2)
Ribosome biogenesis [BR:
spoc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC10925_00635 (rlmCD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_15
Methyltransf_25
MTS
Cons_hypoth95
PCMT
TRM5-TYW2_MTfase
PrmA
N6_N4_Mtase
RrnaAD
DOT1
UPF0020
Methyltransf_11
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
VTT44140
LinkDB
All DBs
Position
1:628114..629475
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AA seq
453 aa
AA seq
DB search
MLKKNDLVEVVIEDLSHQGSGIAKVDGFVFFVENALPTERITMRVLKLNKKIGFGKVEEY
LEKSSYRNEDLDTAYLRTGIADFGHLAYEQQLLFKAKQVKDNLYKTTAIKEVELLPTIGM
DQPYAYRNKAQIPVRRVNGQLETGFFRKNSHDLLPISDFYIQDKEIDKLILFVRDLLRRF
QVSPYNEADQSGLIKNLVVRRGHYSGQMMLVFITSRPKVFRVEQMVQLITEAFPQVVSIM
QNVNDQNGNAIFGKDFKVLYGQDHITDRMLGNDYMVSAQSFYQVNTAMAEKLYQVAIDFS
DLNAEDVVIDAYSGIGTIGLSFAKKVKKVYGVEVIEAAVKDARKNAERNGIHNAEFVIGS
AEATMEKWSKEGIKPSVILVDPPRKGLTESFIKASAAMAPKKITYVSCNPATMARDIKLY
QELGYDLKKVQPVDLFPHTHHVECVVLLQRSNG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagaaaaatgatttagtcgaagtagtaattgaagatttaagccatcaagggtca
ggtatagccaaagtggatggttttgtcttctttgtggagaatgctttaccaactgaacgc
attaccatgcgcgtattaaagctcaataaaaagattggttttggtaaagttgaagaatat
ctagaaaaatcctcgtatcgaaatgaagaccttgacactgcttacttgaggactggtatc
gcagactttggacacctagcttatgaacagcaactacttttcaaagccaagcaagttaaa
gataatctttataaaacaactgctatcaaagaggttgaattattaccaaccattggtatg
gaccagccctatgcctatcgcaataaagcacaaatcccagtgagacgggtgaatggacag
ttagaaacaggttttttcagaaagaattctcatgatttattgcctatctctgacttctat
atccaagataaagaaatagataagctgattctcttcgttcgtgacctcttacgtcgtttc
caagttagtccttataatgaagcagatcagtcaggcctgattaaaaacttagttgtccgg
cgtggccattattctggccaaatgatgttagtctttatcactagccgaccaaaagttttt
cgcgtagagcaaatggttcagctcataaccgaagctttcccacaggtcgtttccattatg
caaaatgttaatgatcaaaatggtaatgctatttttggtaaagacttcaaagtactctac
ggacaagaccacatcaccgacaggatgttgggtaatgactacatggtttctgctcagtcc
ttctaccaagtcaacactgccatggctgaaaaactttaccaggtagctattgatttttca
gatttaaatgctgaagatgtagtcattgatgcttattcaggaatcggtactatcggcttg
tcatttgctaaaaaggttaaaaaagtttatggtgtcgaggtgatagaagctgcagtcaaa
gatgctcgaaaaaacgctgagcgaaatggtatccacaatgctgaatttgttataggtagt
gcagaagcaactatggaaaaatggagcaaagaaggaattaagccaagtgtcattctagtt
gatccacctcgtaaaggcttaacagaaagctttatcaaagcaagtgcagccatggcgcca
aagaaaatcacctatgtatcatgtaacccagctaccatggcgcgtgacatcaagctctac
caagaactaggctacgacctcaaaaaagtacaaccagtagaccttttcccacatacacac
cacgtggagtgcgtagtgttgctacaacgaagcaacgggtaa
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