Streptococcus porcinus: NCTC10925_00874
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Entry
NCTC10925_00874 CDS
T07290
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spoc
Streptococcus porcinus
Pathway
spoc03420
Nucleotide excision repair
spoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10925_00874 (pcrA)
03430 Mismatch repair
NCTC10925_00874 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoc03400
]
NCTC10925_00874 (pcrA)
Enzymes [BR:
spoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10925_00874 (pcrA)
DNA repair and recombination proteins [BR:
spoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10925_00874 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC10925_00874 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
VTT44842
LinkDB
All DBs
Position
1:882568..884844
Genome browser
AA seq
758 aa
AA seq
DB search
MNPLLDGMNDKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKYVNPWNILAITF
TNKAAHEMRERALALNPATQDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLM
KRILKSLNIDSKKWSERSILGTISNAKNDLLDEKAYEAKASDIYTQIVARSYKAYQEELR
RSESMDFDDLIMMTLRLFDQNPEVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFQN
ICVVGDADQSIYGWRGADMQNILDFEKDYPQAKVVLLEENYRSTKTILQAANDVIKNNQN
RRDKKLWTQNSSGEPIVYYRANDERDEAVFIASTISSMCMEMGKSFKDFAVLYRTNAQSR
TIEEAFLKSNIPYTMVGGTKFYSRKEIRDLISYLNIVANPSDNISFERIVNEPKRGVGPG
TLEKLRLFAYDQEMSLLEASSHLFLSPLKGKAAQAIMDLASLLGDLRNHLDQLTITDLAQ
EILDKSGYLQALTIQNTLESQARIENIEEFLSVTKNFDESSATIEESGLDKLGRFLNDLA
LIADTDDSKSDVAEVTLMTLHAAKGLEFPIVFLIGMEEGVFPLSRSLEEQSELEEERRLA
YVGITRAEEILFLTNANTRTLFGKTNYNRPTRFLREISDELLTYKGLARPTSSSFGVKMT
HQNQTHFAQGMSLSQAIQGRKSHAQPQAINSMDLPFGRNNQSGEVHWEIGDIAQHKKWGK
GTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKVN
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttattggatggaatgaatgataaacaagcggaagcagttcaaacaacagaa
ggaccgcttttaattatggctggcgcgggttctggaaaaacaagagtcttaacccatcga
attgcttatttaattgatgaaaaatatgtcaatccttggaatattttggctattacgttt
accaataaagcagcacacgagatgcgagaaagagcgctagctttaaaccctgcaacacaa
gatactctaattgctacctttcactcaatgtgtgtcaggattttaaggcgggaagctgat
catataggttacaatcgtaattttacgattgttgatcctggagagcagcgaacgctaatg
aaacgtattttaaaatctttaaacattgattctaaaaaatggagtgaacggtcaatcttg
ggtaccatttccaatgccaaaaatgacttgctagatgaaaaggcatatgaagccaaagcc
tctgatatctatactcaaattgttgcgcgttcttataaagcttatcaggaagagctacga
cgtagtgaatccatggattttgatgatttaatcatgatgactctaagactgtttgatcaa
aatccagaagttttagcctattaccagcaacgttatcagtatatccatgtcgatgaatac
caggataccaaccatgcccagtatcagttggtgaaattgctagcctcacgttttcaaaat
atctgtgtagttggtgatgccgatcagtctatctacgggtggcggggtgctgatatgcag
aatatactagattttgaaaaagattacccccaagcaaaggttgttctattagaagaaaat
tatcgttcaacaaagacaatcttgcaagctgctaatgacgtcattaagaataatcaaaat
agacgtgataaaaaactatggacgcaaaatagcagtggtgaaccaattgtatactacagg
gcaaatgacgaaagagatgaagctgtttttattgcttcgaccatttcaagtatgtgcatg
gagatggggaaaagttttaaagactttgcagttttatatcgtacaaatgcgcaatctcgg
acaatagaagaagcttttctcaaatcaaatatcccctatacaatggttggaggaacaaaa
ttctatagccgtaaggaaatccgtgatttgatttcctatttaaatattgtagccaaccca
tctgataatatttcttttgaaaggattgtcaatgagcctaaacgtggtgtaggacctggg
acacttgagaaattgaggctgtttgcttatgatcaggaaatgtcgttattagaagcatct
agtcatttattcctctctcctttgaaaggtaaagcagctcaagctattatggatttagca
agccttctgggtgatttacgcaatcatttagatcagttaacaattaccgacttggcacaa
gaaatacttgataaatcaggttatttgcaggcgctaaccattcaaaatacattggaaagt
caggcgcggattgagaatattgaagaattcttatctgttactaaaaactttgacgaatca
agtgcaactatagaagaaagcgggcttgataaactgggtaggtttctaaacgaccttgcc
ttaatagctgacactgatgattctaagagcgatgtagcagaagtgacgttgatgactttg
catgcggccaaaggtttagaattcccaatagtatttttaattgggatggaagaaggtgtg
tttcctttatcaagatctcttgaagagcagagtgaattagaagaagaaagacgattagct
tatgtaggtattactagggctgaagagattctctttttgacgaatgctaatacacggacc
ttatttggtaaaaccaactataatcggccaactcgttttttacgcgaaatttctgatgaa
ttgcttacttacaagggcttagcgcggccgacgagtagttcttttggcgtgaaaatgact
catcaaaatcagacacattttgcccaaggaatgagtttatcccaggctattcaagggcgt
aagtcacatgctcaaccacaagctattaactcgatggatttgccttttggcagaaataac
caaagtggcgaagtgcattgggaaattggcgatattgctcagcacaaaaaatgggggaaa
ggaacagttctagaggtatctggaagtggcaaaactatggaactaaaaataaaatttccg
gaagttggtctgaaaaagttactagccagcgtagctcctattgaaaaagttaactaa
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