Streptococcus porcinus: NCTC10925_01523
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Entry
NCTC10925_01523 CDS
T07290
Symbol
rny
Name
(GenBank) phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
spoc
Streptococcus porcinus
Pathway
spoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10925_01523 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spoc03019
]
NCTC10925_01523 (rny)
Messenger RNA biogenesis [BR:
spoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC10925_01523 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KH_KhpA-B
dUTPase
KH-I_KHDC4-BBP
KH_PNO1_2nd
EpuA
Motif
Other DBs
NCBI-ProteinID:
VTT47154
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Position
1:complement(1525838..1527445)
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AA seq
535 aa
AA seq
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MINIVLLIVCALIGLIIGYALISLKLKAAKENADLTLLNAEQDAVNIRGKAEAEADHIRK
SAERESKANRKELLLEAKEEARKYREEIEQEFKSERQELKQLETRLTERAFSLDRKDDNL
SSKEKVLDSKEQSLTDKSKHIDERQAEVEKLEEEKKAELQRVGAMTIAEAREVILMETEN
NLSHEIATRIREAEREIKDKTDKTAKDLLAQAMQRMAGEYVTEQTITSVHLPDDNMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLESLISDGRIHPARIE
ELVEKNRLEMDNRIREYGEAAAYEIGAPNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
LAGILAGELGENVALARRAGFLHDMGKAIDREVEGSHVEIGMEFARKYKEHPVVVNTIAS
HHGDVEPESVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIATSFEGVQNSFALQ
AGREIRIMVQPEKVSDDEVVILSHKVREKIENNLDYPGNIKVTVIREMRAIDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgattaatattgttttattaattgtttgtgccctcattggtttgataataggttacgca
ttaatttcattgaaattaaaagcagcgaaagaaaatgcggatttgactcttttaaatgct
gagcaagatgctgtaaatattagaggtaaggctgaagccgaggccgatcatattcgaaaa
tcagcagaacgtgaaagtaaggctaatcgtaaagaattacttttagaagcaaaagaagag
gcaagaaaatatcgtgaagaaattgaacaagaatttaaatctgaaagacaagagttaaaa
cagctagaaacacgacttactgagcgtgccttttctcttgaccgaaaagatgataattta
tcaagtaaagaaaaggttcttgatagtaaagaacaaagtctgaccgataaatctaaacat
attgatgagcgccaagcagaagttgaaaaattagaagaagaaaaaaaagctgaattacaa
cgtgttggagctatgacaattgcagaagcacgtgaagttatcttgatggagacagagaat
aatttgtctcatgaaattgcaactcggattcgtgaagcagagcgtgaaattaaagataaa
acagataagacagcaaaagatttattagcccaagccatgcaacgtatggcaggcgagtac
gtaacagaacaaacaattacaagcgttcatttacctgatgacaatatgaagggacgtatc
attggtcgtgaggggcggaatattcgaacgcttgaaagtttaactggtattgatgtcatt
attgatgatactccagaagttgttgtcctttctggttttgatccaatccgtcgagaaatt
gctaggatgaccctggaatcattgatttctgatgggcgtattcatccagctcgcattgaa
gagctagttgaaaaaaatcgacttgaaatggataatcgtattcgtgagtacggtgaagca
gcagcttatgaaattggggctccaaaccttcacccagatttaattaaaattatgggacgc
ttacaatttagaacctcttatgggcaaaatgttttacgtcattcggtagaggttggtaaa
ctagctggtattttggctggtgaacttggtgaaaatgttgcgttggcgcgtagagcagga
ttcttacacgatatgggtaaagccattgaccgtgaggtggaaggcagccatgttgagatt
ggaatggaatttgctcggaaatacaaagagcatccagttgttgtcaacactattgccagt
caccatggtgatgttgagccggaatctgtcattgcagtcattgttgccgccgcagatgca
ctgagttcagcgcgtccaggagctcgtaacgagtcaatggaaaattacattaaacgcctg
cgagatttagaagaaattgctactagctttgaaggtgttcaaaatagttttgccttacaa
gctggtcgtgaaattcgtataatggttcaaccggaaaaagtttcagacgatgaagtggta
attttatctcataaagttcgtgagaagattgaaaataacttagactacccaggaaatatt
aaggttacagttattcgtgaaatgcgagctattgattatgctaaatag
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