Streptococcus porcinus: NCTC10925_01541
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Entry
NCTC10925_01541 CDS
T07290
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
spoc
Streptococcus porcinus
Brite
KEGG Orthology (KO) [BR:
spoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spoc03019
]
NCTC10925_01541 (cshB)
03009 Ribosome biogenesis [BR:
spoc03009
]
NCTC10925_01541 (cshB)
Enzymes [BR:
spoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC10925_01541 (cshB)
Messenger RNA biogenesis [BR:
spoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10925_01541 (cshB)
Ribosome biogenesis [BR:
spoc03009
]
Prokaryotic type
rRNA helicases
NCTC10925_01541 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
VTT47205
LinkDB
All DBs
Position
1:complement(1545456..1546799)
Genome browser
AA seq
447 aa
AA seq
DB search
MSFKDYNFKHYIQKALEEINFKEPTEVQKKLIPIVNSGRDLVGESKTGSGKTHTFLLPIF
EKLDENSRDVQVLITAPSRELATQIFEAAKQIANHSQKEIRLVNYVGGTDKLRQIEKLKG
SQPHIVVGTPGRIYDLVKSGDLAIHKASTFVVDEADMTMDMGFLDTVDKIASSLSKEVQI
LVFSATIPQKLQPFLKKYLRNPLIEQIKTETVIADNIDNWLVSTKGRDKNGHILEILKNI
QPYLAMIFVNTKERADDLHSFLVANGLKVAKIHGGVPPRERKRIMNQVKKLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKM
GISFIPKMLKNGEFRDTYDRDRRYNREKSYQKLDTEMIGLVKKKKKKVKPGYKKKIQWVV
DEKRRKERRAEGKARGRAERKAKKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattataattttaaacattacattcagaaagcacttgaggaaattaac
ttcaaagagcctactgaagtgcaaaaaaaactcataccgattgtcaattctggcagagat
ttagttggtgaatcgaaaacagggtcgggcaaaactcacacattcttgttgccaattttt
gaaaagttagatgaaaatagtagagatgttcaagttctcatcacagctccaagtcgagaa
ttagctactcagatatttgaagctgcaaaacagattgctaatcatagccaaaaagaaatc
cgactagttaactatgttggtggaacagacaagttacgtcaaattgaaaagttaaaaggg
tcgcaacctcacattgttgttggaacaccaggccgtatttatgatttagttaaatctggt
gatttagctattcataaagcaagtacctttgtagttgatgaagcagatatgaccatggat
atggggtttttggataccgttgataagattgcatcatctttatctaaagaagttcaaatc
ttagttttttcggcaactattccacaaaaattacaaccattcttaaaaaaatatttgaga
aatcccctaattgaacaaatcaagacagaaactgttatcgctgataacattgataattgg
ttagtctcaactaaaggtcgggataaaaatggtcacattttagaaattttaaaaaatata
caaccatatctagcaatgatttttgttaacacaaaagaaagagcagacgatctgcacagc
tttttagttgctaatggattaaaagttgcaaagattcatggtggtgttcccccacgagaa
cgtaaacgtattatgaatcaagttaaaaaattagattttgaatacattgttgcgactgat
ttagctgcgcgtggtattgatattgaaggtgttagtcatgttattaatgatgctatccca
caagacttatctttctttgtacatcgtgtgggtcggactggacgtaatggcctttcgggc
acagcaattaccctatatcaaccaagtgatgattcagatattcgagaattagaaaaaatg
ggtatcagttttatccctaaaatgctaaaaaatggcgaatttagagatacatatgatcgc
gatcgtcgttataatcgtgaaaaatcctatcaaaaattagatacggaaatgattggcctt
gttaaaaagaagaagaaaaaagttaaacctggctataagaaaaaaatccaatgggttgtg
gacgaaaaacgtcgtaaagaacgccgagctgagggtaaagcacgtggtcgcgcagagcgt
aaagctaagaaacaaagtttttaa
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