Streptococcus porcinus: NCTC10925_01816
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Entry
NCTC10925_01816 CDS
T07290
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spoc
Streptococcus porcinus
Pathway
spoc03030
DNA replication
spoc03410
Base excision repair
spoc03420
Nucleotide excision repair
spoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10925_01816 (polA)
03410 Base excision repair
NCTC10925_01816 (polA)
03420 Nucleotide excision repair
NCTC10925_01816 (polA)
03440 Homologous recombination
NCTC10925_01816 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spoc03032
]
NCTC10925_01816 (polA)
03400 DNA repair and recombination proteins [BR:
spoc03400
]
NCTC10925_01816 (polA)
Enzymes [BR:
spoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10925_01816 (polA)
DNA replication proteins [BR:
spoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC10925_01816 (polA)
DNA repair and recombination proteins [BR:
spoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC10925_01816 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10925_01816 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
VTT47903
LinkDB
All DBs
Position
1:complement(1815273..1817987)
Genome browser
AA seq
904 aa
AA seq
DB search
MIQRFFGDCFKRSKRLGLCYNKAMENKNKLLLIDGSSVAFRAFFALYNQIDRFRNQSGLH
TNAIYGFHLMLDHMMKRVQPTHILVAFDAGKTTFRTEMYADYKAGRAKTPDEFREQFPYI
REMLTALGVPFYDLANYEADDIIGTLDKMAERTEVPFDVTIVSGDKDLIQLTDANTVVEI
SKKGVAEFEEFTPAYLKEKMGLTPEQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEYG
SLEGIYANIDHFKASKMKENLINDKEQAFLSKTLATINTDAPITIGLEDLIYQGPNVDAL
AAFYDEMGFVQLRTALKTQLPSSSVIEMNYQEVIDNVTDEMFAEDSFFYFEILKDNYHRE
AITAFAWGNQEAIYVSQNPELLRQPLFIKVLEKPIFTYDFKRAKVLLNHLGIEIPEAAFD
ARLANYLLSNVDDNELATIARLHTSISLESDEAIYGKGVKRAFPAKDLLFSHLARKVAVL
AASKPVMLEKLADNGQSDLYYKIELPLANVLAKMEIAGIKVNKQTLMEMAEQNRNVIDAL
TQEIYDLAGEEFNINSPKQLGSILFEKMQLPLTMTKKTKTGYSTAVDVLERLAPIAPIVA
KILDYRQITKLQSTYLIGLQDYIMEDGKIHTRYVQDLTQTGRLSSTDPNLQNIPIRMEQG
RLIRKAFTPSSDDSVLLSSDYSQIELRVLAHISGDEHLIAAFNNNADIHTATAMRVFGIE
KETDVTPNDRRNAKAVNFGIVYGISDFGLSNNLGISRKKARDYIDTYFERYPGIKAYMDS
VVREAKDKGYVETLFKRRRELPDINSRNFNVRSFAERTAINSPIQGSAADILKIAMINLD
KALADRAFKAKMLLQVHDEIVLEVPNQELVTVRQLVKEIMEDAVDLAVPLRADENSGQSW
YEAK
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaaggttttttggtgattgctttaaaaggtcaaagagactaggcttgtgttat
aataaggctatggaaaacaagaataaactattattaattgatggctcttcagtggccttt
cgtgcttttttcgctctttacaatcaaatcgatcgttttcgaaatcagtctggccttcac
accaatgctatttatggcttccaccttatgttggatcatatgatgaagcgggtacagccg
acccatattttggtggcttttgatgcaggtaaaacaacttttcgtactgagatgtatgct
gattacaaggctggtcgtgctaaaacgccagatgaatttcgcgagcagttcccttatatc
cgtgagatgttaacagctcttggcgtccctttctatgacctggctaactacgaagctgat
gatattatcggaactcttgataaaatggcagagcggacagaagtgccatttgatgtcacc
attgttagtggtgacaaagacttgattcaactaactgatgctaatactgttgttgaaatc
tcaaaaaaaggagtggcagaatttgaagaattcacgccagcttatctcaaggagaaaatg
ggactgactcctgagcaatttattgatttaaaagcattgatgggtgataaatctgataat
atccctggggtcactaaaattggagaaaaaacaggcctcaagttactacatgaatatggt
agtttagaaggtatctatgctaatattgatcattttaaggcttctaaaatgaaagaaaac
ttgattaatgacaaggaacaggcctttttatctaaaacccttgcaacaatcaatacagat
gcaccgataactatcggtttagaagatttgatttatcagggaccaaacgttgatgcttta
gctgcattttacgatgagatgggctttgtgcaattgcggacagctttaaaaacgcaatta
ccaagttcttcagttattgaaatgaactatcaggaagtcattgataatgtgacggacgag
atgtttgctgaagatagttttttctactttgaaatcctaaaagataattatcaccgcgaa
gctataactgcttttgcttgggggaatcaagaggctatttatgtcagtcagaatcctgaa
ttgttgcgtcagccattgtttataaaagttttagagaaaccaatttttacctatgatttc
aagagggcaaaagttcttttaaatcatctgggaatagagattcccgaggctgcttttgat
gcacgtctcgccaactaccttttatcgaatgttgatgataatgaattagctactattgct
aggttacatactagtatcagtttagagtccgatgaggctatctatgggaaaggtgttaaa
cgtgcttttccagctaaagatcttcttttttcccatttagctcgtaaggtggctgttctt
gcggctagtaagccagttatgctggaaaaactggcggataacggacaaagtgacctctat
tacaagattgagttgccattagcgaatgttctagctaagatggaaattgctggtataaaa
gtcaataaacagactcttatggaaatggccgagcaaaataggaatgttattgacgctttg
acacaagaaatttatgacttagcaggtgaagagtttaatattaattcaccaaaacaatta
ggtagtatcctttttgagaaaatgcagttacctttaacaatgactaagaaaactaaaacg
ggttattcaacagctgttgatgttttggaacgattagctccgattgcaccaattgttgct
aagatacttgattaccgacaaattacaaaattgcaatcaacctatttgattggtttacaa
gactatattatggaagatggcaaaatccatacgcgatatgtccaagatttgacgcaaaca
ggccgcttatcaagtactgaccccaacctacagaatattccaattcgaatggaacagggg
cgtctaatccgtaaagcctttaccccatctagtgatgattcggttctcttaagttctgat
tattcacaaattgaattacgtgtcttggcgcatatatcaggtgatgaacatttgattgct
gcttttaataacaatgctgatattcatacagcgacggctatgcgtgttttcggtattgag
aaagaaacagatgttactccaaatgatcgtcgtaatgccaaggctgttaattttggtatc
gtttatggtatctctgattttgggctttcaaacaatttggggattagtcgtaaaaaagcg
cgtgactatattgacacctactttgaacgttacccaggtattaaggcatatatggattct
gtggttcgagaggctaaggacaagggttatgttgaaacactctttaagcgtcgtcgtgaa
ttaccggatatcaattctcgtaatttcaacgtaagatcttttgcggagcgaacagccatt
aactcacctattcaagggagcgcagctgatattcttaaaatagccatgattaacctagat
aaagccctagccgacagagcgtttaaggctaaaatgttacttcaagtgcatgatgaaatt
gtccttgaggtacctaatcaagaattagttactgttcggcaactggtcaaggaaataatg
gaagatgctgttgacttggcggtacccttacgtgcggacgagaattcaggccaatcatgg
tatgaagccaaataa
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