Streptomyces poriferorum: P8A21_24110
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Entry
P8A21_24110 CDS
T10937
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spof Streptomyces poriferorum
Pathway
spof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P8A21_24110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spof03021
]
P8A21_24110
03400 DNA repair and recombination proteins [BR:
spof03400
]
P8A21_24110
Enzymes [BR:
spof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P8A21_24110
Transcription machinery [BR:
spof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P8A21_24110
DNA repair and recombination proteins [BR:
spof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P8A21_24110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WLQ50371
LinkDB
All DBs
Position
5493309..5494331
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccgtcgctgaccgaagaggtcgttgacgagttccgctcgcgg
ttcgtcatcgagccgctggagccgggcttcggctacacgctcggcaactccctgcgccgc
acgctcctctcctcgatcccgggtgccgctgtcaccagcatccgtatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtgaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggccccggcctggtcaccgctgctgacatcgccccgccggccggtgtcgaggtccacaac
ccggacctcgtcctcgccacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaagcaggtgggccaggagatcggc
cggattccggtcgactccatctactcgccggtgctcaaggtcacgtacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccccgtgacgccatggcgtcggccggtaagaccctggtcgagctgttcggt
ctggcgcgtgagctcaacatcgacgccgagggcatcgacatgggcccgtcgccgacggac
gccgcgctggctgccgatctggccctgccgatcgaggagctcgagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactcggtgggcgagctcgtggcccgctccgag
gcggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggtatgggcctggcgctgaaggactcgcctcccggcttcgacccgaccgccgcc
gccgacgcattcggcgcggacgacgacgcggacgccggtttcgtggagaccgagcagtac
tga
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