Streptomyces poriferorum: P8A21_26590
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Entry
P8A21_26590 CDS
T10937
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spof Streptomyces poriferorum
Pathway
spof03420
Nucleotide excision repair
spof03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P8A21_26590
03430 Mismatch repair
P8A21_26590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spof03400
]
P8A21_26590
Enzymes [BR:
spof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P8A21_26590
DNA repair and recombination proteins [BR:
spof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P8A21_26590
MMR (mismatch excision repair)
Other MMR factors
P8A21_26590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WLQ50831
LinkDB
All DBs
Position
6035059..6038484
Genome browser
AA seq
1141 aa
AA seq
DB search
MSSRITDPEQLKELLGIPFTPEQTACIIAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIAAGVTDPDVIDPDNPPGEPGISTYHAFAGRLL
TEHGLRIGIEPTTRLLADATRYQLAARVLREAPGSYPALTRSFPTLVSDLLALDAELAEH
LVRPEQLAAYDTGLLRTLETAKLSNAELRKIPETSEARRELLSLTRRYREAKRSRDLLDF
GDQIALSAQLALTRPEVGAILREEYRVVLLDEYQDTSVAQRLLLSALFGSGPDGIASGHA
VTAVGDPCQAIYGWRGASVANLDDFPEHFPHADGTPAARYSLSENRRSGGRLLHLANGLA
APLRAMHEGVEALRPAPGAERDGLVRCALLRTHAEELDWLADSIAHLVRTGKAPGEIAVL
CRTAGDFPEIQAALVARDIPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTG
PRWRIGPRDLALLGRRARLLVQRASHGDDEDFDPDRRLAEAVEGIDPAEVISLADALDTF
LDSGGEQDDRLPFSAEARIRFARLATELRDLRRSLSDPLMDVLHRVLATTGLEVELSASP
QALAARRRETLANFLDVAARFAAVDGEATLLAFLGFLRTAVQYEKGLDNALPGGENTVKV
LTAHKSKGLEWDVVAVPGLVTGQFPSGQSRDAWTSQSQVLPHALRGDTATLPVLHSFDAK
GLKDFKAEMKEHQHTEELRLGYVTFTRPRTLLLGSGHWWGPSQKKPRGPSAFLDALYEHC
AAGYGEIEAWADEPAEGEENPALGEATADHAWPLPLDPAALTRRRAAADTVMAHLEALAA
AGPVPGVYGATEPSAASDHGHLDPLGDELFPEDDPFLDDAPFPDDDEPRAPDAPHVPAAR
APEHLPARLTPEESRTLASWDRDLDALAGELRRARATVRDVLVPASLSATQLLRLADDPD
GFAQELARPMPRPPQPAARRGTRFHAWVESRFEELPLPMLGPDELPGGDESDADIADERD
LAELKEAFERTPYARRTPYRVETPFQITLAGRVIRGRIDAVYRTGNTYEIVDWKTSRTNT
ADPLQLAVYRLAWAELHGLPLTDVTATFLFVRSGESVRPARLPGRPELERILLDEPPPTD
G
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcacgtatcaccgatcccgagcagctcaaggagctgctggggatccccttcacc
ccggagcagacggcgtgcatcatcgcgccgcccgccccgcaggtgatcgtcgccggggcc
gggtcggggaagaccacggtgatggcggcccgtgtggtgtggctggtcggtaccggtcag
gtcgcccccgagcaggtcctcgggctcaccttcaccaacaaggcggccggcgagctcgcc
gagcgcgtccgcaaggccctgatcgccgccggggtcaccgacccggatgtgatcgacccg
gacaaccccccgggcgaacccggcatctccacgtaccacgccttcgccggccggctcctc
accgaacacgggctgcggataggaatcgaacccaccacccgcctcctcgccgacgccacc
cgctaccagctcgccgcccgcgtgctgcgcgaggcccccggctcctatccggccctgacc
aggtcgttcccgaccctggtcagcgatctcctggcgctggacgccgagctcgccgaacat
ctcgtacgtcccgaacagctcgcggcgtacgacaccggactgctccgcaccctggagacc
gccaagctcagcaacgcggaactgcgcaagatccccgagacctccgaggcccgccgcgag
ctgctctcgctgacccggcgctaccgggaggccaagcgcagccgcgacctcctcgacttc
ggtgaccagatcgccctctccgcccagctcgccctcacccgccccgaggtcggcgcgatc
ctgcgcgaggagtaccgagtcgtcctgctcgacgagtaccaggacacctccgtcgcccag
cgcctcctgctctccgccctcttcggcagcggccccgacggcatcgcctccggacacgcc
gtcaccgcggtcggcgacccctgccaggccatctacggctggcgcggcgcctccgtcgcc
aacctcgacgacttcccggagcacttcccgcatgccgacggcaccccggccgcccgctac
tccctcagcgagaaccgccgcagcggcggccgcctcctgcacctcgccaacgggctcgcc
gcccccctgcgcgccatgcacgagggcgtcgaggccctgcgccccgccccgggcgccgag
cgcgacggcctggtccgctgcgccctgctgcgtacccacgccgaggagctcgactggctc
gccgactccatcgcccatctcgtacgcaccggcaaggcccccggcgagatcgccgtcctg
tgccgcacagccggcgacttccccgagatccaggcagcgctcgtcgcccgggacatcccg
gtcgaggtcgtcggcctctccgggctgctccacctccccgaggtcgccgacctcgtggcc
gtctgcgaggtcctccaggacccgggggccaacgcctccctggtccggctcctcaccggt
ccccgctggcggatcggcccccgcgacctcgccctgctcggccgccgcgcccgactcctc
gtccaacgcgcctcccacggagacgacgaggacttcgaccccgaccgccggctcgccgag
gccgtcgagggcatcgacccggccgaggtgatctccctcgcggacgccctggacaccttc
ctcgactccggcggagaacaggacgaccggctgccgttctccgccgaggcccggatccgc
ttcgcccgcctcgccaccgagctgcgcgacctgcgccgctcgctgtccgacccgctgatg
gacgtcctgcaccgggtcctcgccacgacgggcctggaggtcgagctctccgcctctccc
caggccctggcggcccgccgccgcgagaccctcgccaacttcctcgacgtcgcagcccgc
ttcgccgccgtcgacggggaggccacgctcctcgccttcctcggcttcctgcgcaccgcc
gtgcagtacgagaagggcctcgacaatgcgctgcccggcggcgagaacaccgtcaaggtc
ctcaccgcccacaagtccaagggcctggaatgggacgtcgtcgccgtgccgggcctggtc
acgggccagttccccagcggccagtcccgagatgcctggacctcccagtcccaggtactc
ccgcacgccctgcgcggcgacacggccacgctgcccgtcctccactccttcgacgccaag
gggctcaaggacttcaaggcggagatgaaggagcaccagcacaccgaggagctccgactc
ggctacgtcaccttcacccggccccgcaccctgctgctcggctccggccactggtggggc
ccgagccagaagaagccgcgcggcccgtcagccttcctggacgcgctgtacgagcactgc
gcggccggttacggcgagatcgaggcgtgggcggacgagcccgccgagggcgaggagaac
ccggccctcggcgaggccacggccgaccacgcctggccgctgccgctggaccctgccgcg
ctgacccgccgccgggccgccgcggacacggtgatggcccacctggaggcgctggccgcg
gccggcccggtgcccggtgtgtacggggcgaccgagccgtccgccgcgtcggaccacggc
cacctcgaccctctcggcgacgagctgttccccgaggacgaccccttcctggacgacgcg
cccttccccgacgacgacgagccccgggcccccgacgccccgcacgtcccggcggcccgc
gcccccgagcacctccccgcacgcctcacccccgaggagtcccgcaccctcgcctcctgg
gaccgcgacctggacgccctcgccggtgagctgcgccgggcccgcgccaccgtgcgggac
gtcctcgtgcccgcctcgctctccgccacccagctgctgcgcctggccgacgaccccgac
ggcttcgcccaggaactggcccgccccatgccccgcccgccgcagcccgccgcccgccgg
ggcacccgcttccacgcctgggtcgagtcccgcttcgaggagctccctctgcccatgctc
ggccccgacgagctgcccggcggtgacgagagcgacgccgacatcgccgacgagcgcgat
ctcgccgagctcaaggaggccttcgagcgcaccccgtacgcccgccgcaccccctaccgg
gtcgagacgccgttccagatcaccctggccggccgggtgatccggggccgcatcgacgcg
gtgtaccgcacggggaacacgtacgagatcgtcgactggaagaccagccgcaccaacacc
gccgaccccctccagctcgccgtctaccgcctcgcctgggccgaactgcacgggctgccg
ctcaccgacgtgacggccaccttcctcttcgtgcgcagcggcgagagcgtccgccccgcc
cgcctcccgggccgcccggaactggagcggatcctcctggacgagccacctcctacggac
ggataa
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