Streptomyces poriferorum: P8A21_29640
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Entry
P8A21_29640 CDS
T10937
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spof Streptomyces poriferorum
Brite
KEGG Orthology (KO) [BR:
spof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spof03009
]
P8A21_29640 (rimO)
Enzymes [BR:
spof01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
P8A21_29640 (rimO)
Ribosome biogenesis [BR:
spof03009
]
Prokaryotic type
ribosomal protein modification factors
P8A21_29640 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WLQ51388
LinkDB
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Position
6786671..6788149
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AA seq
492 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEDASDADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAARQDAAVALPGHAQEATPAPADLPDGVAPVSGPRAPLR
RRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVMLVS
ENNTSYGKDLGDIRLLETLLPELADVEGIERIRVSYLQPAEMRPGLIDVLTSTPKVAPYF
DLSFQHSAPGVLRAMRRFGDTDSFLELLHTIRSKAPQAGARSNFIVGFPGETEADLAELE
RFLTGARLDAIGVFGYSDEDGTEAVGYENKLDADTIAERLAHISQLAEELTSQRAEERLG
ESLQVLVESVEPTEDEPRAVGRAAHQAPETDGQVLFTAREGLVPGRMVEAKVVGTEGVDL
VAESCELAEVAR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcagcggacggctgggagctcgtcgaggatgcctcc
gatgccgatgtcgccgtggtcaacacctgtggattcgtcgaggccgccaagaaggactcc
gtcgatgccctgctcgaagccaatgatctgaaggaccacggccggacccaggccgtcgtc
gccgtcggctgcatggccgagcgctacggcaaggacctcgccgaggccctgccggaagcg
gacggagtcctcggattcgatgactacgcagacatctccgaccgcctccagaccatcctc
aacggcggcatccacgcctcccacaccccgcgcgaccgccgcaagctgctgcccatcagt
ccggccgcacgccaggacgcagccgtggctctgcccggccacgcccaggaggccacgccg
gcccccgccgaccttccggacggagtcgcgccggtctccggtccccgggcgcccctgcgc
cgacggctgggcaccagccccgtcgcctccgtgaagctggcctcgggctgcgaccgccgc
tgctccttctgcgccatcccgtccttccgcggttccttcatctcgcggcgtccctcggac
gtcctgggcgagacgcgctggctggcggagcagggcgtgaaggaggtcatgctggtctcc
gagaacaacacctcgtacggcaaggacctgggcgacatccgcctcctggagacactgctt
ccggagctcgcggacgtcgaggggatcgagcgcatccgggtcagctatctgcagcccgcc
gagatgcggcccggtctgatcgacgtactgacgtccacgccgaaggtcgcgccctacttc
gacctgtccttccagcactcggcccccggcgtgctgcgcgccatgcggcgcttcggtgac
accgacagcttcctggagctcctgcacaccatccggagcaaggcgccgcaggccggcgcc
cgctccaacttcatcgtgggcttcccgggcgagaccgaggcggacctggcggagctggaa
cggttcctcaccggcgcccgcctcgacgccatcggcgtcttcggctactccgacgaggac
ggcacggaggcggtcggctacgagaacaagctggacgccgacacgatcgccgagcgtctg
gcgcacatctcgcagctggccgaggagctgacctcgcagcgggccgaggagcgcctcgga
gagtcgctgcaggtgctggtcgagtcggtcgagcccacggaggacgagccgcgtgccgtg
ggcagagccgcccaccaggcgcccgaaacggacgggcaggtgctcttcaccgcacgcgaa
ggacttgtcccgggccgtatggtcgaggcgaaggtagtgggcaccgaaggcgtggacctg
gtggcggagagctgtgaacttgcggaggtagccagatga
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